新学術領域研「植物多能性幹細胞」

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研究成果(論文発表、A02班)

[すべて] [A01の成果] [A02の成果]

2021

[191] Copy number analyses of DNA repair genes reveal the role of poly (ADP-ribose) polymerase (PARP) in tree longevity,
Yuta Aoyagi Blue; Junko Kusumi; Akiko Satake, Iscience, 24, 7, 102779, 2021
DOI: 10.1016/j.isci.2021.102779.
[190] A multimodal metabolomics approach using imaging mass spectrometry and liquid chromatography-tandem mass spectrometry for spatially characterizing monoterpene indole alkaloids secreted from roots,
Ryo Nakabayashi; Noriko Takeda-Kamiya; Yutaka Yamada; Tetsuya Mori; Mai Uzaki; Takashi Nirasawa; Kiminori Toyooka; Kazuki Saito, Plant Biotechnology, 21, 1 - 6, 2021
DOI: 10.5511/plantbiotechnology.21.0504a.
[189] Gene co-expression network analysis identifies BEH3 as a stabilizer of secondary vascular development in Arabidopsis,
Tomoyuki Furuya; Masato Saito; Haruka Uchimura; Akiko Satake; Shohei Nosaki; Takuya Miyakawa; Shunji Shimadzu; Wataru Yamori; Masaru Tanokura; Hiroo Fukuda; Yuki Kondo, The Plant Cell, 33, 8, 2618 - 2636, 2021
DOI: 10.1093/plcell/koab151.
[188] A unique mode of keratinocyte death requires intracellular acidification,
Takeshi Matsui; Nanako Kadono-Maekubo; Yoshiro Suzuki; Yuki Furuichi; Keiichiro Shiraga; Hiroyuki Sasaki; Azusa Ishida; Sonoko Takahashi; Takaharu Okada; Kiminori Toyooka; Jafar Sharif; Takaya Abe; Hiroshi Kiyonari; Makoto Tominaga; Atsushi Miyawaki; Masayuki Amagai, Proc. Natl. Acad. Sci. USA, 118, 17, e2020722118, 2021
DOI: 10.1073/pnas.2020722118.
[187] Major components of the KARRIKIN INSENSITIVE2-dependent signaling pathway are conserved in the liverwort Marchantia polymorpha,
Yohei Mizuno; Aino Komatsu; Shota Shimazaki; Satoshi Naramoto; Keisuke Inoue; Xiaonan Xie; Kimitsune Ishizaki; Takayuki Kohchi; Junko Kyozuka, Plant Cell, 33, 7, 2395 - 2411, 2021
DOI: 10.1093/plcell/koab106.
[186] Plant stem cell research is uncovering the secrets of longevity and persistent growth,
Masaaki Umeda; Momoko Ikeuchi; Masaki Ishikawa; Toshiro Ito; Ryuichi Nishihama; Junko Kyozuka; Keiko U. Torii; Akiko Satake; Gohta Goshima; Hitoshi Sakakibara, The plant journal, 106, 2, 326 - 335, 2021
DOI: 10.1111/tpj.15184.
[185] Cargo sorting zones in the trans-Golgi network visualized by super-resolution confocal live imaging microscopy in plants,
Yutaro Shimizu; Junpei Takagi; Emi Ito; Yoko Ito; Kazuo Ebine; Yamato Komatsu; Yumi Goto; Mayuko Sato; Kiminori Toyooka; Takashi Ueda; Kazuo Kurokawa; Tomohiro Uemura; Akihiko Nakano, Nat. Commun., 12, 1901, 2021
DOI: 10.1038/s41467-021-22267-0.
[184] Mitochondrial movement during its association with chloroplasts in Arabidopsis thaliana,
Kazusato Oikawa; Takuto Imai; Chonprakun Thagun; Kiminori Toyooka; Takeshi Yoshizumi; Kazuya Ishikawa; Yutaka Kodama; Keiji Numata, Communications Biology, 4, 292, 1384, 2021
DOI: 10.1038/s42003-021-01833-8.
[183] Testing the environmental prediction hypothesis for community‐wide mass flowering in South‐East Asia,
Akiko Satake; Tze Leong Yao; Yoshiko Kosugi; Yu-Yun Chen, Biotropica, 53, 2, 608 - 618, 2021
DOI: 10.1111/btp.12903.
[182] Fundamental mechanisms of the stem cell regulation in land plants: lesson from shoot apical cells in bryophytes,
Yuki Hata; Junko Kyozuka, Plant Mol. Biol., , 2021
DOI: 10.1007/s11103-021-01126-y.
[181] Three-dimensional reconstructions of haustoria in two parasitic plant species in the Orobanchaceae,
Natsumi Masumoto; Yuki Suzuki; Songkui Cui; Mayumi Wakazaki; Mayuko Sato; Kie Kumaishi; Arisa Shibata; Kaori M Furuta; Yasunori Ichihashi; Ken Shirasu; Kiminori Toyooka; Yoshinobu Sato; Satoko Yoshida, Plant Physiol., 185, 4, 1429 - 1442, 2021
DOI: 10.1093/plphys/kiab005.
[180] Assessing the impacts of climate change on reproductive phenology in tropical rainforests of Southeast Asia,
Shinya Numata; Koharu Yamaguch; Masaaki Shimizu; Gen Sakurai; Ayaka Morimoto; Noraliza Alias; Nashatul Zaimah Noor Azman; Tetsuro Hosaka; Akiko Satake, bioRxiv, , 2021.
[179] VISUAL network analysis reveals the role of BEH3 as a stabilizer in the secondary vascular development in Arabidopsis,
Tomoyuki Furuya; Masato Saito; Haruka Uchimura; Akiko Satake; Shohei Nosaki; Takuya Miyakawa; Shunji Shimadzu; Wataru Yamori; Masaru Tanokura; Hiroo Fukuda; Yuki Kondo, bioRxiv, , 2021
DOI: 10.1101/2021.01.19.427273.
[178] H3K27me3 demethylases alter HSP22 and HSP17. 6C expression in response to recurring heat in Arabidopsis,
Nobutoshi Yamaguchi; Satoshi Matsubara; Kaori Yoshimizu; Motohide Seki; Kouta Hamada; Mari Kamitani; Yuko Kurita; Yasuyuki Nomura; Kota Nagashima; Soichi Inagaki; Takamasa Suzuki; Eng-Seng Gan; Taiko To; Tetsuji Kakutani; Atsushi J Nagano; Akiko Satake; Toshiro Ito, Nat. Commun., 12, 1, 1 - 16, 2021
DOI: 10.1038/s41467-021-23766.
[177] Practical application of proximal sensing for monitoring the growth of Physcomitrium patens.,
Hiroki Wakabayashi; Osamu Matsuda; Tomomichi Fujita; Atsushi Kume, Biological Sciences in Space, 35, 32 - 40, 2021.
[176] High linear energy transfer carbon-ion irradiation upregulates PD-L1 expression more significantly than X-rays in human osteosarcoma U2OS cells,
Tiara Bunga Mayang Permata; Hiro Sato; Wenchao Gu; Sangeeta Kakoti; Yuki Uchihara; Yukihiko Yoshimatsu; Itaru Sato; Reona Kato; Motohiro Yamauchi; Keiji Suzuki; Takahiro Oike; Yoshito Tsushima; Soehartati Gondhowiardjo; Tatsuya Ohno; Takaaki Yasuhara; Atsushi Shibata, Journal of Radiation Research, 62, 5, 773 - 781, 2021
DOI: 10.1093/jrr/rrab050.
[175] Robust control of floral meristem determinacy by position-specific multifunctions of KNUCKLES,
Erlei Shang; Xin Wang; Tinghan Li; Fengfei Guo; Toshiro Ito; Bo Sun, Proc. Natl. Acad. Sci. USA, 118, 36, , 2021
DOI: 10.1073/pnas.2102826118.
[174] WIND transcription factors orchestrate wound-induced callus formation, vascular reconnection and defense response in Arabidopsis,
Akira Iwase; Yuki Kondo; Anuphon Laohavisit; Arika Takebayashi; Momoko Ikeuchi; Keita Matsuoka; Masashi Asahina; Nobutaka Mitsuda; Ken Shirasu; Hiroo Fukuda; Keiko Sugimoto, New Phytol., , 2021
DOI: 10.1111/nph.17594.
[173] Arabidopsis thaliana subclass I ACTIN DEPOLYMERIZING FACTORs and vegetative ACTIN2/8 are novel regulators of endoreplication,
Noriko Inada; Naoki Takahashi; Masaaki Umeda, J. Plant Res., in press, , 2021
DOI: 10.1007/s10265-021-01333-0.
[172] Expression profiling of H3K27me3 demethylase genes during plant development and in response to environmental stress in Arabidopsis,
Nobutoshi Yamaguchi; Toshiro Ito, Plant signaling & behavior, , 2021
DOI: 10.1080/15592324.2021.1950445.
[171] Analysis of radiotherapy‑induced alteration of CD8+ T cells and PD‑L1 expression in patients with uterine cervical squamous cell carcinoma,
Yasumasa Mori; Hiro Sato; Takuya Kumazawa; Tiara Bunga Mayang Permata; Yuya Yoshimoto; Kazutoshi Murata; Shin-Ei Noda; Takuya Kaminuma; Ken Ando; Takahiro Oike; Noriyuki Okonogi; Kohei Okada; Sangeeta Kakoti; Keiji Suzuki; Hayato Ikota; Hideaki Yokoo; Atsushi Shibata; et al., Oncology Letters, 21, 6, , 2021
DOI: 10.3892/ol.2021.12707.
[170] Alterations in hormonal signals spatially coordinate distinct responses to DNA double-strand breaks in Arabidopsis roots,
Naoki Takahashi; Soichi Inagaki; Kohei Nishimura; Hitoshi Sakakibara; Ioanna Antoniadi; Michal Karady; Karin Ljung; Masaaki Umeda, Sci. Adv., 7, 25, eabg0993, 2021
DOI: 10.1126/sciadv.abg0993.
[169] H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis,
Nobutoshi Yamaguchi; Satoshi Matsubara; Kaori Yoshimizu; Motohide Seki; Kouta Hamada; Mari Kamitani; Yuko Kurita; Yasuyuki Nomura; Kota Nagashima; Soichi Inagaki; Takamasa Suzuki; Eng-Seng Gan; Taiko To; Tetsuji Kakutani; Atsushi J. Nagano; Akiko Satake; Toshiro Ito, Nat. Commun., 12, 3480, , 2021
DOI: 10.1038/s41467-021-23766-w.
[168] JMJ Histone Demethylases Balance H3K27me3 and H3K4me3 Levels at the HSP21 Locus during Heat Acclimation in Arabidopsis,
Nobutoshi Yamaguchi; Toshiro Ito, biomolecules, 11, (6)852, , 2021
DOI: 10.3390/biom11060852.
[167] Gene co-expression network analysis identifies BEH3 as a stabilizer of secondary vascular development in Arabidopsis,
Tomoyuki Furuya; Masato Saito; Haruka Uchimura; Akiko Satake; Shohei Nosaki; Takuya Miyakawa; Shunji Shimadzu; Wataru Yamori; Masaru Tanokura; Hiroo Fukuda; Yuki Kondo, Plant Cell, , 2021
DOI: 10.1093/plcell/koab151.
[166] CYTOKININ-RESPONSIVE GROWTH REGULATOR regulates cell expansion and cytokinin-mediated cell cycle progression,
Joonghyuk Park; Seungchul Lee; Geuntae Park; Hyunwoo Cho; Daeseok Choi; Masaaki Umeda; Yeonhee Choi; Daehee Hwang; Ildoo Hwang, Plant Physiol., 186, 3, 1734 - 1746, 2021
DOI: doi.org/10.1093/plphys/kiab180.
[165] Persistent directional growth capability in Arabidopsis thaliana pollen tubes after nuclear elimination from the apex,
Kazuki Motomura; Hidenori Takeuchi; Michitaka Notaguchi; Haruna Tsuchi; Atsushi Takeda; Tetsu Kinoshita; Tetsuya Higashiyama; Daisuke Maruyama, Nat. Commun., 12, 2331, 2021
DOI: 10.1038/s41467-021-22661-8.
[164] Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems.,
Matsuoka K; Sato R; Matsukura Y; Kawajiri Y; Iino H; Nozawa N; Shibata K; Kondo Y; Satoh S; Asahina M, Communications Biology, 4, 369, , 2021
DOI: 10.1038/s42003-021-01895-8.
[163] OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species.,
Hiromi Kajiya-Kanegae; Hajime Ohyanagi; Toshinobu Ebata; Yasuhiro Tanizawa; Akio Onogi; Yuji Sawada; Masami Yokota Hirai; Zi-Xuan Wang; Bin Han; Atsushi Toyoda; Asao Fujiyama; Hiroyoshi Iwata; Katsutoshi Tsuda; Toshiya Suzuki; Misuzu Nosaka-Takahashi; Ken-Ichi Nonomura; Yasukazu Nakamura; et al., Rice (New York, N.Y.), 14, 1, , 2021
DOI: 10.1186/s12284-021-00468-x.
[162] Identification of a Devernalization Inducer by Chemical Screening Approaches in Arabidopsis thaliana,
Makoto Shirakawa; Yukaho Morisaki; Eng-Seng Gan; Ayato Sato; Toshiro Ito, Front. Plant Sci., 12, , 2021
DOI: 10.3389/fpls.2021.634068.
[161] Plant stem cell research is uncovering the secrets of longevity and persistent growth,
Masaaki Umeda; Momoko Ikeuchi; Masaki Ishikawa; Toshiro Ito; Ryuichi Nishihama; Junko Kyozuka; Keiko U. Torii; Akiko Satake; Gohta Goshima; Hitoshi Sakakibara, PLANT J., 106, 2, 326 - 335, 2021
DOI: 10.1111/tpj.15184.
[160] ANAC044 is associated with P reutilization in P deficient Arabidopsis thaliana root cell wall in an ethylene dependent manner,
Xiao Long Zhang; Qi Wu; Ye Tao; Xiao Fang Zhu; Naoki Takahashi; Masaaki Umeda; Ren Fang Shen; Jian Feng Ma, Environ. Exp. Bot., 185, 104386, 2021
DOI: 10.1016/j.envexpbot.2021.104386.
[159] Polyspermy block in the central cell during double fertilization of Arabidopsis thaliana,
Shiori Nagahara; Hidenori Takeuchi; Tetsuya Higashiyama, Frontiers in plant science, 11, 588700, 2021
DOI: 10.3389/fpls.2020.588700.
[158] Substitution of deoxycholate with the amphiphilic polymer amphipol A8-35 improves the stability of large protein complexes during native electrophoresis.,
Shinsa Kameo; Michiki Aso; Ryo Furukawa; Renon Matsumae; Makio Yokono; Tomomichi Fujita; Ayumi Tanaka; Ryouichi Tanaka; Atsushi Takabayashi, Plant Cell Physiol., 62, 2, 348 - 355, 2021
DOI: 10.1093/pcp/pcaa165.
[157] One factor, many systems: the floral homeotic protein AGAMOUS and its epigenetic regulatory mechanisms,
Margaret Anne Pelayo; Nobutoshi Yamaguchi; Toshiro Ito, Curr. Opin. Plant Biol., 61, 102009, , 2021
DOI: 10.1016/j.pbi.2021.102009.
[156] Quantitative volumetric analysis of the Golgi apparatus following X-ray irradiation by super-resolution 3D-SIM microscopy,
Takahiro Oike; Yuki Uchihara; Tiara Bunga Mayang Permata; Soehartati Gondhowiardjo; Tatsuya Ohno; Atsushi Shibata, Medical Molecular Morphology, 54, 2, , 2021
DOI: 10.1007/s00795-020-00277-z.

2020

[155] The Arabidopsis NRT1/PTR FAMILY Protein NPF7.3/NRT1.5 is an Indole-3-butyric Acid Transporter Involved in Root Gravitropism,
Shunsuke Watanabe; Naoki Takahashi; Yuri Kanno; Hiromi Suzuki; Yuki Aoi; Noriko Takeda-Kamiya; Kiminori Toyooka; Hiroyuki Kasahara; Ken-Ichiro Hayashi; Masaaki Umeda; Mitsunori Seo, Proc. Natl. Acad. Sci. USA, 117, 49, 31500 - 31509, 2020
DOI: 10.1073/pnas.2013305117.
[154] Subnuclear gene positioning through lamina association affects copper tolerance,
Yuki Sakamoto; Mayuko Sato; Yoshikatsu Sato; Akihito Harada; Takamasa Suzuki; Chieko Goto; Kentaro Tamura; Kiminori Toyooka; Hiroshi Kimura; Yasuyuki Ohkawa; Ikuko Hara-Nishimura; Shingo Takagi; Sachihiro Matsunaga, Nat. Commun., 11, 1, 1 - 12, 2020
DOI: 10.1038/s41467-020-19621-z.
[153] Carotenoid accumulation in the eyespot apparatus required for phototaxis is independent of chloroplast development in Euglena gracilis,
Shun Tamaki; Yuri Tanno; Shota Kato; Kazunari Ozasa; Mayumi Wakazaki; Mayuko Sato; Kiminori Toyooka; Takashi Maoka; Takahiro Ishikawa; Mizuo Maeda; Tomoko Shinomura, Plant Science, 298, 110564, 2020
DOI: 10.1016/j.plantsci.2020.110564.
[152] Cytosolic GLUTAMINE SYNTHETASE1; 1 Modulates Metabolism and Chloroplast Development in Roots,
Miyako Kusano; Atsushi Fukushima; Mayumi Tabuchi-Kobayashi; Kazuhiro Funayama; Soichi Kojima; Kyonoshin Maruyama; Yoshiharu Y Yamamoto; Tomoko Nishizawa; Makoto Kobayashi; Mayumi Wakazaki; Mayuko Sato; Kiminori Toyooka; Kumiko Osanai-Kondo; Yoshinori Utsumi; Motoaki Seki; Chihaya Fukai; Kazuki Saito; Tomoyuki Yamaya, Plant Physiol., 182, 4, 1894 - 1909, 2020
DOI: https://doi.org/10.1104/pp.19.01118.
[151] Dimorphic Leaf Development of the Aquatic Plant Callitriche palustris L. Through Differential Cell Division and Expansion,
Hiroyuki Koga; Yuki Doll; Kei Hashimoto; Kiminori Toyooka; Hirokazu Tsukaya, Front. Plant Sci., 11, 269, 2020
DOI: 10.3389/fpls.2020.00269.
[150] Acclimation process of the chlorophyll d-bearing cyanobacterium Acaryochloris marina to an orange light environment revealed by transcriptomic analysis and electron microscopic observation,
Tomonori Kashimoto; Keita Miyake; Mayuko Sato; Kaisei Maeda; Chikahiro Matsumoto; Masahiko Ikeuchi; Kiminori Toyooka; Satoru Watanabe; Yu Kanesaki; Rei Narikawa, Journal of General and Applied Microbiology, 66, 2, 106 - 115, 2020
DOI: 10.2323/jgam.2019.11.008.
[149] Metabolomics with 15N Labeling for Characterizing Missing Monoterpene Indole Alkaloids in Plants,
Ryo Nakabayashi; Tetsuya Mori; Noriko Takeda; Kiminori Toyooka; Hiroshi Sudo; Hiroshi Tsugawa; Kazuki Saito, Analytical Chemistry, 92, 8, 5670 - 5675, 2020
DOI: 10.1021/acs.analchem.9b03860.
[148] The origin and evolution of the ALOG proteins, members of a plant-specific transcription factor family, in land plants.,
Satoshi Naramoto; Yuki Hata; Junko Kyozuka, J. Plant Res., 133, 3, 323 - 329, 2020
DOI: 10.1007/s10265-020-01171-6.
[147] Suppression of Leaf Blade Development by BLADE-ON-PETIOLE Orthologs Is a Common Strategy for Underground Rhizome Growth.,
Taiyo Toriba; Hiroki Tokunaga; Kazuma Nagasawa; Fanyu Nie; Akiko Yoshida; Junko Kyozuka, Curr. Biol., 30, 3, 509 - 516, 2020
DOI: 10.1016/j.cub.2019.11.055.
[146] Small temperature variations are a key regulator of reproductive growth and assimilate storage in oil palm (Elaeis guineensis),
Naoki Tani; Zubaidah Aimi Abdul Hamid; Natra Joseph; Othman Sulaiman; Rokiah Hashim; Takamitsu Arai; Akiko Satake; Toshiaki Kondo; Akihiko Kosugi, Sci Rep, 10, 1, 1 - 11, 2020
DOI: 10.1038/s41598-019-57170-8.
[145] High Humidity Causes Abnormalities in the Process of Appressorial Formation of Blumeria graminis f. sp. hordei,
Koreyuki Sugai; Hiroshi Inoue; Chie Inoue; Mayuko Sato; Mayumi Wakazaki; Kappei Kobayashi; Masamichi Nishiguchi; Kiminori Toyooka; Naoto Yamaoka; Takashi Yaeno, Pathogens, 9, 1, 45, 2020
DOI: 10.3390/pathogens9010045.
[144] Removal of repressive histone marks creates epigenetic memory of recurring heat in Arabidopsis,
Nobutoshi Yamaguchi; Satoshi Matsubara; Kaori Yoshimizu; Motohide Seki; Kouta Hamada; Mari Kamitani; Yuko Kurita; Soichi Inagaki; Takamasa Suzuki; Eng-Seng Gan; Taiko To; Tetsuji Kakutani; Atsushi J. Nagano; Akiko Satake; Toshiro Ito, BioRxiv, , 2020
DOI: 10.1101/2020.05.10.086611.
[143] Genetic diversity and the origin of commercial plantation of Indonesian teak on Java Island,
Eko Prasetyo; Widiyatno; Sapto Indrioko; Mohammad Na’iem; Tetsuya Matsui; Ayumi Matsuo; Yoshihisa Suyama; Yoshihiko Tsumura, Tree Genetics & Genomes, 16, 34, 2020
DOI: 10.1007/s11295-020-1427-5.
[142] Histone demethylases coordinate the antagonistic interaction between abscisic acid and brassinosteroid signaling in Arabidopsis,
Jinfeng Wu; Mingli Yan; Dawei Zhang; Dinggang Zhou; Nobutoshi Yamaguchi; Toshiro Ito, Front. Plant Sci., , 2020
DOI: 10.3389/fpls.2020.596835.
[141] The Arabidopsis NRT1/PTR FAMILY protein NPF7.3/NRT1.5 is an indole-3-butyric acid transporter involved in root gravitropism,
Shunsuke Watanabe; Naoki Takahashi; Yuri Kanno; Hiromi Suzuki; Yuki Aoi; Noriko Takeda-Kamiya; Kiminori Toyooka; Hiroyuki Kasahara; Ken-Ichiro Hayashi; Masaaki Umeda; Mitsunori Seo, Proc. Natl. Acad. Sci. USA, 117, 49, 31500 - 31509, 2020
DOI: 10.1073/pnas.2013305117.
[140] A Peptide Pair Coordinates Regular Ovule Initiation Patterns with Seed Number and Fruit Size,
Nozomi Kawamoto; Dunia Pino Del Carpio; Alexander Hofmann; Yoko Mizuta; Daisuke Kurihara; Tetsuya Higashiyama; Naoyuki Uchida; Keiko U Torii; Lucia Colombo; Georg Groth; Rüdiger Simon, Curr. Biol., 30, 22, 4352 - 4361, 2020
DOI: 10.1016/j.cub.2020.08.050.
[139] Morphological and physiological framework underlying plant longevity in Arabidopsis thaliana,
Yukun Wang; Kie Kumaishi; Takamasa Suzuki; Yasunori Ichihashi; Nobutoshi Yamaguchi; Makoto Shirakawa; Toshiro Ito, Front. Plant Sci., 11, , 2020
DOI: 10.3389/fpls.2020.600726.
[138] Comparison of Clonogenic Survival Data Obtained by Pre- and Post-Irradiation Methods,
Takahiro Oike; Yuka Hirota; Narisa Dewi Maulany Darwis; Atsushi Shibata; Tatsuya Ohno, Journal of Personalized Medicine, 10, 4, , 2020
DOI: 10.3390/jpm10040171.
[137] Induction of Multichotomous Branching by CLAVATA Peptide in Marchantia polymorpha,
Yuki Hirakawa; Toko Fujimoto; Sakiko Ishida; Naoyuki Uchida; Shinichiro Sawa; Tomohiro Kiyosue; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; John L Bowman, Curr. Biol., 30, 19, 3833 - 3840, 2020
DOI: 10.1016/j.cub.2020.07.016.
[136] A super sensitive auxin-inducible degron system with an engineered auxin-TIR1 pair.,
Kohei Nishimura; Ryotaro Yamada; Shinya Hagihara; Rie Iwasaki; Naoyuki Uchida; Takumi Kamura; Koji Takahashi; Keiko U Torii; Tatsuo Fukagawa, Nucleic Acids Res., 48, 18, e108 , 2020
DOI: 10.1093/nar/gkaa748.
[135] Induction of Micronuclei in Cervical Cancer Treated with Radiotherapy,
Daijiro Kobayashi; Takahiro Oike; Kazutoshi Murata; Daisuke Irie; Yuka Hirota; Hiro Sato; Atsushi Shibata; Tatsuya Ohno, Journal of Personalized Medicine, 10, 3, , 2020
DOI: 10.3390/jpm10030110.
[134] Reporting of methodologies used for clonogenic assays to determine radiosensitivity,
Takahiro Oike; Shuichiro Komatsu; Yuka Komatsu; Ankita Nachankar; Narisa Dewi Maulany Darwis; Atsushi Shibata; Tatsuya Ohno, Journal of Radiation Research, 61, 6, 828 - 831, 2020
DOI: 10.1093/jrr/rraa064.
[133] RNF8 promotes high linear energy transfer carbon-ion-induced DNA double-stranded break repair in serum-starved human cells,
Nakako Izumi Nakajima; Motohiro Yamauchi; Sangeeta Kakoti; Liu Cuihua; Reona Kato; Tiara Bunga Mayang Permata; Moito Iijima; Hirohiko Yajima; Takaaki Yasuhara; Shigeru Yamada; Sumitaka Hasegawa; Atsushi Shibata, DNA Repair, 91-92, , 2020
DOI: 10.1016/j.dnarep.2020.102872 .
[132] Relative Biological Effectiveness of Carbon Ions for Head-and-Neck Squamous Cell Carcinomas According to Human Papillomavirus Status,
Naoto Osu; Daijiro Kobayashi; Katsuyuki Shirai; Atsushi Musha; Hiro Sato; Yuka Hirota; Atsushi Shibata; Takahiro Oike; Tatsuya Ohno, Journal of Personalized Medicine, 10, 3, , 2020
DOI: 10.3390/jpm10030071.
[131] An Artificial Conversion of Roots into Organs with Shoot Stem Characteristics by Inducing Two Transcription Factors,
Shigeru Hanano; Hajime Tomatsu; Ai Ohnishi; Koichi Kobayashi; Yuki Kondo; Shigeyuki Betsuyaku; Eiji Takita; Yoshiyuki Ogata; Keishi Ozawa; Kunihiro Suda; Tsutomu Hosouchi; Takahiro Nagase; Hideyuki Suzuki; Nozomu Sakurai; Hiroshi Masumoto; Hiroo Fukuda; Daisuke Shibata, iScience, 23, 7, 101332, 2020
DOI: https://doi.org/10.1016/j.isci.2020.101332.
[130] CDKD-dependent activation of CDKA;1 controls microtubule dynamics and cytokinesis during meiosis,
Kostika Sofroni; Hirotomo Takatsuka; Chao Yang; Nico Dissmeyer; Shinichiro Komaki; Yuki Hamamura; Lev Böttger; Masaaki Umeda; Arp Schnittger, J. Cell Biol., 209, 8, e201907016, 2020
DOI: 10.1083/jcb.201907016.
[129] VISUAL-CC system uncovers the role of GSK3 as an orchestrator of vascular cell type ratio in plants,
Takayuki Tamaki; Satoyo Oya; Makiko Naito; Yasuko Ozawa; Tomoyuki Furuya; Masato Saito; Mayuko Sato; Mayumi Wakazaki; Kiminori Toyooka; Hiroo Fukuda; Ykä Helariutta; Yuki Kondo , Commun. biol., 3, 184, 2020
DOI: 10.1038/s42003-020-0907-3.
[128] Functional analysis of the plant chromosomal passenger complex,
Shinichiro Komaki; Hidenori Takeuchi; Yuki Hamamura; Maren Heese; Takashi Hashimoto; Arp Schnittger, Plant Physiol., 183, 4, 1586 - 1599, 2020
DOI: 10.1104/pp.20.00344.
[127] Comparative functional analyses of DWARF14 and KARRIKIN INSENSITIVE 2 in drought adaptation of Arabidopsis thaliana,
Weiqiang Li; Kien Huu Nguyen; Ha Duc Chu; Yasuko Watanabe; Yuriko Osakabe; Mayuko Sato; Kiminori Toyooka; Mitsunori Seo; Lei Tian; Chunjie Tian; Shinjiro Yamaguchi; Maho Tanaka; Motoaki Seki; Lam‐Son Phan Tran, PLANT J., 103, 1, 111 - 127, 2020
DOI: 10.1111/tpj.14712.
[126] SUPPRESSOR OF GAMMA RESPONSE 1 acts as a regulator coordinating crosstalk between DNA damage response and immune response in Arabidopsis thaliana,
Kaoru Okamoto Yoshiyama; Naoki Aoshima; Naoki Takahashi; Tomoaki Sakamoto; Kei Hiruma; Yusuke Saijo; Jun Hidema; Masaaki Umeda; Seisuke Kimura, Plant Mol. Biol., 103, 3, 321 - 340, 2020
DOI: 10.1007/s11103-020-00994-0.
[125] Deep Imaging Analysis in VISUAL Reveals the Role of YABBY Genes in Vascular Stem Cell Fate Determination.,
Alif Meem Nurani; Yasuko Ozawa; Tomoyuki Furuya; Yuki Sakamoto; Kazuo Ebine; Sachihiro Matsunaga; Takashi Ueda; Hiroo Fukuda; Yuki Kondo, Plant Cell Physiol., 61, 2, 255 - 264, 2020
DOI: 10.1093/pcp/pcaa002.
[124] Carotenoids in the eyespot apparatus are required for triggering phototaxis in Euglena gracilis,
Shota Kato; Kazunari Ozasa; Mizuo Maeda; Yuri Tanno; Shun Tamaki; Mieko Higuchi‐Takeuchi; Keiji Numata; Yutaka Kodama; Mayuko Sato; Kiminori Toyooka; Tomoko Shinomura, PLANT J., 101, 1091 - 1102, 2020
DOI: 10.1111/tpj.14576.
[123] AtNOT1 is a novel regulator of gene expression during pollen development,
Kazuki Motomura; Toshihiro Arae; Haruka Araki-Uramoto; Yuya Suzuki; Hidenori Takeuchi; Takamasa Suzuki; Yasunori Ichihashi; Arisa Shibata; Ken Shirasu; Atsushi Takeda; Tetsuya Higashiyama; Yukako Chiba, Plant Cell Physiol., 61, 4, 712 - 721, 2020
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[122] Molecular Basis for Natural Vegetative Propagation via Regeneration in North American Lake Cress, Rorippa aquatica (Brassicaceae),
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[121] Titanium dioxide nanoparticles (TiO2 NPs) promote growth and ameliorate salinity stress effects on essential oil profile and biochemical attributes of Dracocephalum moldavica,
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[120] Impact of autophagy on gene expression and tapetal programmed cell death during pollen development in rice,
Shigeru Hanamata; Jumpei Sawada; Seijiro Ono; Kazunori Ogawa; Togo Fukunaga; Ken-Ichi Nonomura; Seisuke Kimura; Takamitsu Kurusu; Kazuyuki Kuchitsu, Front. Plant Sci., 11, 172, 2020
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[119] ERdj3B-mediated quality control maintains anther development at high temperatures,
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[118] Establishment of an Agrobacterium mediated transformation protocol for the detection of cytokinin in the heterophyllous plant Hygrophila difformis (Acanthaceae),
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[117] Quantitative imaging reveals distinct contributions of SnRK2 and ABI3 in plasmodesmatal permeability in Physcomitrella patens,
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[116] AP2/ERF transcription factors regulate salt-induced chloroplast division in the moss Physcomitrella patens,
Huong T. Do; Prapaporn Pongthai; Menaka Ariyarathne; Ooi-Kock Teh; Tomomichi Fujita, Journal of Plant Research, 133, 537 - 548, 2020
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[115] Metabolic Control of Gametophore Shoot Formation through Arginine in the Moss Physcomitrium patens,
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[114] Agrobacterium-mediated genetic transformation of wild Oryza species using immature embryos,
Sae Shimizu-Sato; Katsutoshi Tsuda; Misuzu Nosaka-Takahashi; Toshiya Suzuki; Seijiro Ono; Nhung Kim Ta; Yuri Yoshida; Ken-Ichi Nonomura; Yutaka Sato, RICE, 13, 33, 2020
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[113] Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice,
Kaoru Tonosaki; Akemi Ono; Megumi Kunisada; Megumi Nishino; Hiroki Nagata; Shingo Sakamoto; Saku T. Kijima; Hiroyasu Furuumi; Ken-ichi Nonomura; Yutaka Sato; Masaru Ohme-Takagi; Masaki Endo; Luca Comai; Katsunori Hatakeyama; Taiji Kawakatsu; Tetsu Kinoshita, Plant Cell, , 2020
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2019

[112] Effects of cold atmospheric plasma irradiation on Arabidopsis seedlings,
Mime Kobayashi; Yukun Wang; Shinya Kumagai; Yukiharu Uraoka; Toshiro Ito, Japanese Journal of Applied Physics, 59, SAAB09, , 2019
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[106] Green fluorescent protein-based glucose indicators report glucose dynamics in living cells.,
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[105] Keeping the shape of plant tissue for visualizing metabolite features in segmentation and correlation analysis of imaging mass spectrometry in Asparagus officinalis,
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Yuki Sugiyama; Yoshinobu Nagashima; Mayumi Wakazaki; Mayuko Sato; Kiminori Toyooka; Hiroo Fukuda; Yoshihisa Oda, Nat. Commun., 10, 468, , 2019
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[101] A conserved regulatory mechanism mediates the convergent evolution of plant shoot lateral organs,
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[100] Pretreatment of lignocellulosic biomass with cattle rumen fluid for methane production: fate of added rumen microbes and indigenous microbes of methane seed sludge,
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[99] From theory to experiments for testing the proximate mechanisms of mast seeding: an agenda for an experimental ecology,
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[98] The manifold actions of signaling peptides on subcellular receptor dynamics specify stomatal cell fate,
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[97] Comparative transcriptome analysis of galls from four different host plants suggests the molecular mechanism of gall development,
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[95] Role of ancient lakes in genetic and phenotypic diversification of freshwater snails,
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[94] Multiplexed ISSR genotyping by sequencing distinguishes two precious coral species (Anthozoa: Octocorallia: Coralliidae) that share a mitochondrial haplotype,
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[89] Curing cytoplasmic male sterility via TALEN-mediated mitochondrial genome editing.,
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[86] Testing the effects of plant species loss on multiple ecosystem functions based on extinction scenarios,
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[85] Heat Induced Epitope Retrieval (HIER) Assisted Protein Immunostaining in Maize,
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[84] Cytokinin signaling is essential for organ formation in Marchantia polymorpha,
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[82] Seedling selection using molecular approach for ex situ conservation of critically endangered tree species (Vatica bantamensis (Hassk.) Benth. & Hook. ex Miq.) in Java, Indonesia,
Yayan Wahyu C. Kusuma; Siti R. Ariati; Rosniati A. Risna; Chika Mitsuyuki; Yoshihisa Suyama; Yuji Isagi, Tropical Conservation Science, 12, 1 - 12, 2019
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[81] Integration of transcriptional repression and Polycomb-mediated silencing of WUSCHEL in floral meristems,
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[80] Multichromosomal structure of the onion mitochondrial genome and a transcript analysis,
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[79] Enigmatic incongruence between mtDNA and nDNA revealed by multi-locus phylogenomic analyses in freshwater snails,
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[78] Histone demethylases control root elongation in response to stress-signaling hormone abscisic acid,
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[77] A regulatory module controlling stress-induced cell cycle arrest in Arabidopsis,
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[76] Developmental analysis of the early steps in strigolactone-mediated axillary bud dormancy in rice.,
Le Luo; Megumu Takahashi; Hiromu Kameoka; Ruyi Qin; Toshihide Shiga; Yuri Kanno; Mitsunori Seo; Masaki Ito; Guohua Xu; Junko Kyozuka, PLANT J., 97, 6, 1006 - 1021, 2019
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[74] BLADE-ON-PETIOLE genes temporally and developmentally regulate the sheath to blade ratio of rice leaves,
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[73] BELL1-like homeobox genes regulate inflorescence architecture and meristem maintenance in rice.,
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[72] Strigolactone perception and deactivation by a hydrolase receptor DWARF14,
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[71] Mobile PEAR transcription factors integrate positional cues to prime cambial growth,
Shunsuke Miyashima; Pawel Roszak; Iris Sevilem; Koichi Toyokura; Bernhard Blob; Jung-ok Heo; Nathan Mellor; Hanna Help-Rinta-Rahko; Sofia Otero; Wouter Smet; Mark Boekschoten; Guido Hooiveld; Kayo Hashimoto; Ondřej Smetana; Riccardo Siligato; Eva-Sophie Wallner; Ari Pekka Mähönen; et al., Nature, , 2019
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[70] Distinct phylogeographic structure of the halophyte Suaeda malacosperma (Chenopodiaceae/Amaranthaceae), endemic to Korea–Japan region, influenced by historical range shift dynamics,
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[69] Lateral Inhibition by a Peptide Hormone-Receptor Cascade during Arabidopsis Lateral Root Founder Cell Formation.,
Koichi Toyokura; Tatsuaki Goh; Hidefumi Shinohara; Akinori Shinoda; Yuki Kondo; Yoshie Okamoto; Takeo Uehara; Koichi Fujimoto; Yoko Okushima; Yoshifumi Ikeyama; Keiji Nakajima; Tetsuro Mimura; Masao Tasaka; Yoshikatsu Matsubayashi; Hidehiro Fukaki, Dev. Cell, 48, 1, 64 - 75, 2019
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[68] Synchronized expression of FLOWERING LOCUS T between branches underlies mass flowering in Fagus crenata,
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[67] Drought and cool temperature cue general flowering synergistically in the aseasonal tropical forests of Southeast Asia,
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[64] Abscisic acid acts as a regulator of molecular trafficking through plasmodesmata in the moss Physcomitrella patens,
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[63] The PSI-PSII megacomplex in green plants,
Makio Yokono; Atsushi Takabayashi; Junko Kishimoto; Tomomichi Fujita; Masakazu Iwai; Akio Murakami; Seiji Akimoto; Ayumi Tanaka, Plant Cell Physiol., , 2019
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2018

[58] A whole-cell electron tomography model of vacuole biogenesis in Arabidopsis root cells,
Yong Cui; Wenhan Cao; Yilin He; Qiong Zhao; Mayumi Wakazaki; Xiaohong Zhuang; Jiayang Gao; Yonglun Zeng; Caiji Gao; Yu Ding; Hiu Yan Wong; Wing Shing Wong; Ham Karen Lam; Pengfei Wang; Takashi Ueda; Marcela Rojas-Pierce; Kiminori Toyooka; Byung-Ho Kang et al, Nat. Plants, 5, 95 - 105, 2018
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[57] RGB-color intensiometric indicators visualize spatiotemporal dynamics of ATP in single cells.,
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[30] Development of microsatellite markers for endangered orchid Calanthe izu-insularis (Orchidaceae),
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[28] The phylogeography of the cycad genus Dioon (Zamiaceae) clarifies its Cenozoic expansion and diversification in the Mexican transition zone,
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2017

[20] Top-down metabolomic approaches for nitrogen-containing metabolite,
Ryo Nakabayashi; Kei Hashimoto; Kiminori Toyooka; Kazuki Saito, Analytical Chemistry, 89, 5, 2698 - 2703, 2017
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[19] The trans-Golgi network and the Golgi stacks behave independently during regeneration after Brefeldin A treatment in tobacco BY-2 cells,
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[17] Photosynthetic Entrainment of the Circadian Clock Facilitates Plant Growth under Environmental Fluctuations: Perspectives from an Integrated Model of Phase Oscillator and Phloem Transportation,
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[16] Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation,
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[15] Arabidopsis R1R2R3-Myb proteins are essential for inhibiting cell division in response to DNA damage,
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[14] Discovery of synthetic small molecules that enhance the number of stomata: C-H functionalization chemistry for plant biology,
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[13] A Novel Plasma Membrane-Anchored Protein Regulates Xylem Cell-Wall Deposition through Microtubule-Dependent Lateral Inhibition of Rho GTPase Domains,
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[7] Regulation of Strigolactone Biosynthesis by Gibberellin Signaling,
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[4] The pitcher plant Cephalotus genome reveals genetic changes associated with carnivory.,
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[3] Occurrence of brassinosteroids in non-flowering land plants, liverwort, moss, lycophyte and fern,
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[2] PCoM-DB update: a protein co-migration database for photosynthetic organisms.,
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[1] A hypergravity environment increases chloroplast size, photosynthesis, and plant growth in the moss Physcomitrella patens,
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