新学術領域研「植物多能性幹細胞」

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研究成果(論文発表 A01班)

[すべて] [A01の成果] [A02の成果] 

2021

[163] Microtubule-associated proteins promote microtubule generation in the absence of γ-tubulin in human colon cancer cells,
Kenta Tsuchiya; Gohta Goshima, J Cell Biol., , 2021.
[162] Genetic interactions between the CUP-SHAPED COTYLEDON and the BELLRINGER genes indicate their overlapping functions in carpel boundary development in Arabidopsis thaliana,
Kayo Yamamoto; Masao Tasaka; Mitsuhiro Aida, Plant Morphol., 33, 95 - 100, 2021.
[161] Postgenital fusion and epidermal cell fate control during gynoecium development,
Aika Yokoi; Mitsuhiro Aida, Cytologia, 86, 1 - 2, 2021
DOI: 10.1508/cytologia.86.1.
[160] Fluorescent protein-based imaging and tissue-specific RNA-seq analysis of Arabidopsis hydathodes,
Hiroki Yagi; Atsushi J Nagano; Jaewook Kim; Kentaro Tamura; Nobuyoshi Mochizuki; Akira Nagatani; Tomonao Matsushita; Tomoo Shimada , J. Exp. Bot., 72, 4, 1260 - 1270, 2021
DOI: 10.1093/jxb/eraa519.
[159] Three-dimensional reconstructions of haustoria in two parasitic plant species in the Orobanchaceae,
Natsumi Masumoto; Yuki Suzuki; Songkui Cui; Mayumi Wakazaki; Mayuko Sato; Kie Kumaishi; Arisa Shibata; Kaori M Furuta; Yasunori Ichihashi; Ken Shirasu; Kiminori Toyooka; Yoshinobu Sato; Satoko Yoshida, Plant Physiol., 185, 4, 1429 - 1442, 2021
DOI: 10.1093/plphys/kiab005.
[158] ClearSee-based clearing protocol for 3D visualization of Arabidopsis thaliana embryos,
Ayame Imoto; Mizuki Yamada; Takumi Sakamoto; Airi Okuyama; Takashi Ishida; Shinichiro Sawa; Mitsuhiro Aida, Plants, 10, 190, 2021
DOI: 10.3390/plants10020190.
[157] Rhizobia use a pathogenic-like effector to hijack leguminous nodulation signalling,
Safirah T. N. Ratu; Albin Teulet; Hiroki Miwa; Sachiko Masuda; Hien P. Nguyen; Michiko Yasuda; Shusei Sato; Takakazu Kaneko; Makoto Hayashi; Eric Giraud; Shin Okazaki, Sci Rep, 11, 2034, 2021
DOI: 10.1038/s41598-021-81598-6.
[156] The 3D architecture and molecular foundations of de novo centriole assembly via bicentrioles,
Sónia Gomes Pereira; Ana Laura Sousa; Catarina Nabais; Tiago Paixão ; Alexander J. Holmes; Martin Schorb; Gohta Goshima; Erin M Tranfield; Jörg D Becker; Mónica Bettencourt-Dias, Curr. Biol., 31, 1 - 14, 2021
DOI: 10.1016/j.cub.2021.07.063.
[155] Overexpression of ATG8/LC3 enhances wound-induced somatic reprogramming in Physcomitrium patens,
Jakob V. Kanne; Masaki Ishikawa; Simon Bressendorff; Jeppe Ansbøl; Mitsuyasu Hasebe; Eleazar Rodriguez; Morten Petersen, Autophagy, , 2021
DOI: 10.1080/15548627.2021.1975913.
[154] Strigolactone biosynthesis catalyzed by cytochrome P450 and sulfotransferase in sorghum,
Akiyoshi Yoda; Narumi Mori; Kohki Akiyama; Mayu Kikuchi; Xiaonan Xie; Kenji Miura; Kaori Yoneyama; Kanna Sato-Izawa; Shinjiro Yamaguchi; Koichi Yoneyama; David C. Nelson; Takahito Nomura, New Phytol., , 2021
DOI: 10.1111/nph.17737.
[153] Coordination between growth and stress responses by DELLA in the liverwort Marchantia polymorpha,
Jorge Hernández-García; Rui Sun; Antonio Serrano-Mislata; Keisuke Inoue; Carlos Vargas-Chávez; David Esteve-Bruna; Vicent Arbona; Shohei Yamaoka; Ryuichi Nishihama; Takayuki Kohchi; Miguel A. Blázquez, Curr. Biol., 31, 16, 3678 - 3686, 2021
DOI: 10.1016/j.cub.2021.06.010.
[152] Agrobacterium-mediated transient transformation of Marchantia liverworts,
Hidekazu Iwakawa; Katharina Melkonian; Titus Schlüter; Hyung-Woo Jeon; Ryuichi Nishihama; Hiroyasu Motose; Hirofumi Nakagami, Plant Cell Physiol., , 2021
DOI: 10.1093/pcp/pcab126.
[151] WIND transcription factors orchestrate wound-induced callus formation, vascular reconnection and defense response in Arabidopsis,
Akira Iwase; Yuki Kondo; Anuphon Laohavisit; Arika Takebayashi; Momoko Ikeuchi; Keita Matsuoka; Masashi Asahina; Nobutaka Mitsuda; Ken Shirasu; Hiroo Fukuda; Keiko Sugimoto, New Phytol., , 2021
DOI: 10.1111/nph.17594.
[150] Transcriptome dynamics of epidermal reprogramming during direct shoot regeneration in Torenia fournieri,
Hatsune Morinaka; Akihito Mamiya; Hiroaki Tamaki; Akitoshi Iwamoto; Takamasa Suzuki; Ayako Kawamura; Momoko Ikeuchi; Akira Iwase; Tetsuya Higashiyama; Keiko Sugimoto; Munetaka Sugiyama, Plant Cell Physiol., 62, , 2021
DOI: 10.1093/pcp/pcab101.
[149] Fungal-type terpene synthases in Marchantia polymorpha are involved in sesquiterpene biosynthesis in oil body cells,
Ryosuke Takizawa; Miki Hatada; Yuta Moriwaki; Sachika Abe; Yuko Yamashita; Ryoma Arimitsu; Katsuyuki T. Yamato; Ryuichi Nishihama; Takayuki Kohchi; Takao Koeduka; Feng Chen; Kenji Matsui, Plant Cell Physiol., 62, 3, 528 - 537, 2021
DOI: 10.1093/pcp/pcaa175.
[148] Identification of six CPC-like genes and their differential expression in leaves of tea plant, Camellia sinensis,
Juri Wakamatsu; Takuji Wada; Wakana Tanaka; Sotaro Fujii ; Yukichi Fujikawa; Yoshihiro Sambongi; Rumi Tominaga, J Plant Physiol., 263, 153465, 2021
DOI: 10.1016/j.jplph.2021.153465.
[147] Diversified amino acid-mediated allosteric regulation of phosphoglycerate dehydrogenase for serine biosynthesis in land plants,
Eiji Okamura; Kinuka Ohtaka; Ryuichi Nishihama; Kai Uchida; Ayuko Kuwahara; Keiichi Mochida; Masami Yokota Hirai , Biochem J., 478, 12, 2217 - 2232, 2021
DOI: 10.1042/BCJ20210191.
[146] Alterations in hormonal signals spatially coordinate distinct responses to DNA double-strand breaks in Arabidopsis roots,
Naoki Takahashi; Soichi Inagaki; Kohei Nishimura; Hitoshi Sakakibara; Ioanna Antoniadi; Michal Karady; Karin Ljung; Masaaki Umeda, Sci. Adv., 7, 25, eabg0993, 2021
DOI: 10.1126/sciadv.abg0993.
[145] An Agrobacterium-mediated stable transformation technique for the hornwort model Anthoceros agrestis,
Eftychios Frangedakis; Manuel Waller; Tomoaki Nishiyama; Hirokazu Tsukaya; Xia Xu; Yuling Yue; Michelle Tjahjadi; Andika Gunadi; Joyce Van Eck; Fay-Wei Li; Péter Szövényi; Keiko Sakakibara, New Phytol., , 2021
DOI: 10.1111/nph.17524.
[144] Function of the TRY C-terminal region artificially fused with its homologous transcription factors inducing root hair differentiation in Arabidopsis,
Juri Wakamatsu; Kosuke Nagao; Yukino Sumida; Wakana Tanaka ; Yoshihiro Sambongi; Rumi Tominaga, Biosci Biotechnol Biochem., 85, 5, 1114 - 1120, 2021
DOI: 10.1093/bbb/zbab036.
[143] OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species.,
Hiromi Kajiya-Kanegae; Hajime Ohyanagi; Toshinobu Ebata; Yasuhiro Tanizawa; Akio Onogi; Yuji Sawada; Masami Yokota Hirai; Zi-Xuan Wang; Bin Han; Atsushi Toyoda; Asao Fujiyama; Hiroyoshi Iwata; Katsutoshi Tsuda; Toshiya Suzuki; Misuzu Nosaka-Takahashi; Ken-Ichi Nonomura; Yasukazu Nakamura; et al., Rice (New York, N.Y.), 14, 1, , 2021
DOI: 10.1186/s12284-021-00468-x.
[142] Plant stem cell research is uncovering the secrets of longevity and persistent growth,
Masaaki Umeda; Momoko Ikeuchi; Masaki Ishikawa; Toshiro Ito; Ryuichi Nishihama; Junko Kyozuka; Keiko U. Torii; Akiko Satake; Gohta Goshima; Hitoshi Sakakibara, PLANT J., 106, 2, 326 - 335, 2021
DOI: 10.1111/tpj.15184.
[141] Temperature-dependent fasciation mutants provide a link between mitochondrial RNA processing and lateral root morphogenesis.,
Kurataka Otsuka; Akihito Mamiya; Mineko Konishi; Mamoru Nozaki; Atsuko Kinoshita; Hiroaki Tamaki; Masaki Arita; Masato Saito; Kayoko Yamamoto; Takushi Hachiya; Ko Noguchi; Takashi Ueda; Yusuke Yagi; Takehito Kobayashi; Takahiro Nakamura; Yasushi Sato; Takashi Hirayama; Munetaka Sugiyama, eLife, 10, e61611, 2021
DOI: 10.7554/eLife.61611.
[140] Ran-GTP Is Non-essential to Activate NuMA for Mitotic Spindle-Pole Focusing but Dynamically Polarizes HURP Near Chromosomes,
Kenta Tsuchiya; Hisato Hayashi; Momoko Nishina; Masako Okumura; Yoshikatsu Sato; Masato T. Kanemaki; Gohta Goshima; Tomomi Kiyomitsu, Curr. Biol., 31, 1, 115 - 127, 2021
DOI: 10.1016/j.cub.2020.09.091.

2020

[139] Higher Stomatal Density Improves Photosynthetic Induction and Biomass Production in Arabidopsis Under Fluctuating Light,
Kazuma Sakoda; Wataru Yamori; Tomoo Shimada; Shigeo S Sugano; Ikuko Hara-Nishimura; Yu Tanaka, Front. Plant Sci., 11, 589603, 2020
DOI: 10.3389/fpls.2020.589603.
[138] Apple latent spherical virus (ALSV)-induced gene silencing in a medicinal plant, Lithospermum erythrorhizon,
Yuki Izuishi; Natsumi Isaka; Hao Li; Kohei Nakanishi ; Joji Kageyama; Kazuya Ishikawa; Tomoo Shimada; Chikara Masuta; Nobuyuki Yoshikawa; Hiroaki Kusano ; Kazufumi Yazaki, Sci Rep, 10, 1, 13555, 2020
DOI: 10.1038/s41598-020-70469-1.
[137] Dynamic Capture and Release of Endoplasmic Reticulum Exit Sites by Golgi Stacks in Arabidopsis,
Junpei Takagi; Yoshitaka Kimori; Tomoo Shimada; Ikuko Hara-Nishimura, iScience, 23, 7, 101265, 2020
DOI: 10.1016/j.isci.2020.101265.
[136] AT-Hook Transcription Factors Restrict Petiole Growth by Antagonizing PIFs,
David S. Favero; Ayako Kawamura; Michitaro Shibata; Arika Takebayashi; Jae-Hoon Jung; Takamasa Suzuki; Katja E. Jaeger; Takashi Ishida; Akira Iwase; Philip A. Wigge; Keiko Sugimoto, Curr. Biol., in, press, , 2020
DOI: https://doi.org/10.1016/j.cub.2020.02.017.
[135] Kinesin-13 and Kinesin-8 Function during Cell Growth and Division in the Moss Physcomitrella patens,
Shu Yao Leong ; Tomoya Edzuka; Gohta Goshima; Moé Yamada, Plant Cell, 32, 3, 683 - 702, 2020
DOI: 10.1105/tpc.19.00521.
[134] The roles of two FLORAL ORGAN NUMBER genes, FON1 and FON2, differ in axillary meristem development,
Wakana Tanaka; Hiro-Yuki Hirano, Cytologia, 85, 4, 319 - 324, 2020
DOI: 10.1508/cytologia.85.319.
[133] A Peptide Pair Coordinates Regular Ovule Initiation Patterns with Seed Number and Fruit Size,
Nozomi Kawamoto; Dunia Pino Del Carpio; Alexander Hofmann; Yoko Mizuta; Daisuke Kurihara; Tetsuya Higashiyama; Naoyuki Uchida; Keiko U Torii; Lucia Colombo; Georg Groth; Rüdiger Simon, Curr. Biol., 30, 22, 4352 - 4361, 2020
DOI: 10.1016/j.cub.2020.08.050.
[132] Transcriptional and morpho-Physiological responses of Marchantia polymorpha upon phosphate starvation,
Félix Rico-Reséndiz; Sergio A. Cervantes-Pérez; Annie Espinal-Centeno; Melissa Dipp-Álvarez; Araceli Oropeza-Aburto; Enrique Hurtado-Bautista; Andrés Cruz-Hernández; John L. Bowman; Kimitsune Ishizaki; Mario A. Arteaga-Vázquez; Luis Herrera-Estrella; Alfredo Cruz-Ramírez, International Journal of Molecular Sciences, 21, 21, 8354, 2020
DOI: 10.3390/ijms21218354.
[131] Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.),
Chetphilin Suriyasak; Yui Oyama; Toshiaki Ishida; Kiyoshi Mashiguchi; Shinjiro Yamaguchi; Norimitsu Hamaoka; Mari Iwaya-Inoue; Yushi Ishibashi, Sci Rep, 10, 17378, 2020
DOI: 10.1038/s41598-020-74281-9.
[130] Induction of Multichotomous Branching by CLAVATA Peptide in Marchantia polymorpha,
Yuki Hirakawa; Toko Fujimoto; Sakiko Ishida; Naoyuki Uchida; Shinichiro Sawa; Tomohiro Kiyosue; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; John L Bowman, Curr. Biol., 30, 19, 3833 - 3840, 2020
DOI: 10.1016/j.cub.2020.07.016.
[129] Induction of multichotomous branching by CLAVATA peptide in Marchantia polymorpha,
Yuki Hirakawa; Toko Fujimoto; Sakiko Ishida; Naoyuki Uchida; Shinichiro Sawa; Tomohiro Kiyosue; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; John L. Bowman, Curr. Biol., 30, 19, 3833 - 3840, 2020
DOI: 10.1016/j.cub.2020.07.016.
[128] A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci,
Mamidi S; Healey A; Huang P; Grimwood J; Jenkins J; Barry K; Sreedasyam A; Shu S; Lovell JT; Feldman M; Wu J; Yu Y; Chen C; Johnson J; Sakakibara H; Kiba T; Sakurai T; Tavares R, et al., Nature Biotechnology, 38, 1203 - 1210, 2020
DOI: 10.1038/s41587-020-0681-2.
[127] A super sensitive auxin-inducible degron system with an engineered auxin-TIR1 pair.,
Kohei Nishimura; Ryotaro Yamada; Shinya Hagihara; Rie Iwasaki; Naoyuki Uchida; Takumi Kamura; Koji Takahashi; Keiko U Torii; Tatsuo Fukagawa, Nucleic Acids Res., 48, 18, e108 , 2020
DOI: 10.1093/nar/gkaa748.
[126] Columnar growth phenotype in apple results from gibberellin deficiency by ectopic expression of a dioxygenase gene,
Okada K; Wada M; Takebayashi Y; Kojima M; Sakakibara H; Nakayasu M; Mizutani M; Nakajima M; Moriya S; Shimizu T; Abe K, Tree Physiology, 40, 1205 - 1216, 2020
DOI: 10.1093/treephys/tpaa049.
[125] The inhibition of SlIAA9 mimics an increase in endogenous auxin and mediates changes in auxin and gibberellin signalling during parthenocarpic fruit development in tomato,
Kim JS; Ezura K; Lee J; Kojima M; Takebayashi Y; Sakakibara H; Ariizumi T; Ezura H, J. Plant Physiol., 252, 153238, 2020
DOI: 10.1016/j.jplph.2020.153238.
[124] DNA damage triggers reprogramming of differentiated cells into stem cells in Physcomitrella,
Nan Gu; Yosuke Tamada; Akihiro Imai; Gergo Palfalvi; Yukiko Kabeya; Shuji Shigenobu; Masaki Ishikawa; Karel J. Angelis; Chunli Chen; Mitsuyasu Hasebe, Nat. Plants, 6, 1098 - 1105, 2020
DOI: 10.1038/s41477-020-0745-9.
[123] Establishment of the embryonic shoot meristem involves activation of two classes of genes with opposing functions for meristem activities,
Mitsuhiro Aida; Yuka Tsubakimoto; Satoko Shimizu; Hiroyuki Ogisu; Masako Kamiya; Ryosuke Iwamoto; Seiji Takeda; Md Rezaul Karim; Masaharu Mizutani; Michael Lenhard; Masao Tasaka, Int. J. Mol. Sci., 21, 16, 5864, 2020
DOI: 10.3390/ijms21165864.
[122] Antagonistic regulation of the gibberellic acid response during stem growth in rice,
Nagai K; Mori Y; Ishikawa S; Furuta T; Gamuyao R; Niimi Y; Hobo T; Fukuda M; Kojima M; Takebayashi Y; Fukushima A; Himuro Y; Kobayashi M; Ackley W; Hisano H; Sato K; Yoshida A; Wu J, et al., Nature, 584, 109 - 114, 2020
DOI: 10.1038/s41586-020-2501-8.
[121] Rho of Plants GTPases and Cytoskeletal Elements Control Nuclear Positioning and Asymmetric Cell Division during Physcomitrella patens Branching.,
Peishan Yi; Gohta Goshima, Curr. Biol., 30, 14, 2860 - 2868, 2020
DOI: 10.1016/j.cub.2020.05.022.
[120] CURLED LATER1 encoding the largest subunit of the Elongator complex has a unique role in leaf development and meristem function in rice,
Hikari Matsumoto; Yukiko Yasui; Yoshihiro Ohmori; Wakana Tanaka; Tetsuya Ishikawa; Hisataka Numa; Kenta Shirasawa; Yojiro Taniguchi; Junichi Tanaka; Yasuhiro Suzuki; Hiro-Yuki Hirano, PLANT J., 104, 2, 351 - 364, 2020
DOI: 10.1111/tpj.14925.
[119] Diversity of pectin rhamnogalacturonan I rhamnosyltransferases in glycosyltransferase family 106,
Bussarin Wachananawat; Takeshi Kuroha; Yuto Takenaka; Hiroyuki Kajiura; Satoshi Naramoto; Ryusuke Yokoyama; Kimitsune Ishizaki; Kazuhiko Nishitani; Takeshi Ishimizu, Front. Plant Sci., 11, 997, 2020
DOI: 10.3389/fpls.2020.00997.
[118] The SUMO E3 Ligase SIZ1 Negatively Regulates Shoot Regeneration,
Coleman Duncan; Ayako Kawamura; Momoko Ikeuchi; David S Favero; Alice Lambolez; Bart Rymen; Akira Iwase; Takamasa Suzuki; Keiko Sugimoto, Plant Physiol., 184, 1, 330 - 344, 2020
DOI: 10.1104/pp.20.00626.
[117] The SUMO E3 ligase SIZ1 negatively regulates shoot regeneration,
Duncan Coleman; Ayako Kawamura; Momoko Ikeuchi; David Seth Favero; Alice Lambolez; Bart Rymen; Akira Iwase; Takamasa Suzuki; Keiko Sugimoto, Plant Physiol., , 2020.
[116] Multi-omics analysis on an agroecosystem reveals the significant role of organic nitrogen to increase agricultural crop yield,
Yasunori Ichihashi; Yasuhiro Date; Amiu Shino; Tomoko Shimizu; Arisa Shibata; Kie Kumaishi; Fumiaki Funahashi; Kenji Wakayama; Kohei Yamazaki; Akio Umezawa; Takumi Sato; Makoto Kobayashi; Mayu Kamimura; Miyako Kusano; Fang-Sik Che; Martin O`Brien; Keitaro Tanoi; Makoto Hayashi, Proc. Natl. Acad. Sci. USA, 117, 25, 14552 - 14560, 2020
DOI: 10.1073/pnas.1917259117.
[115] Diverse panicle architecture results from various combinations of Prl5/GA20ox4 and Pbl6/APO1 alleles,
Agata A; Ando K; Ota S; Kojima M; Takebayashi Y; Takehara S; Doi K; Ueguchi-Tanaka M; Suzuki T; Sakakibara H; Matsuoka M; Ashikari M; Inukai Y; Kitano H; Hobo T, Commun Biol., 3, 302, 2020
DOI: 10.1038/s42003-020-1036-8.
[114] Design principles of a minimal auxin response system,
Hirotaka Kato; Sumanth K. Mutte; Hidemasa Suzuki; Isidro Crespo; Shubhajit Das; Tatyana Radoeva; Mattia Fontana; Yoshihiro Yoshitake; Emi Hainiwa; Willy van den Berg; Simon Lindhoud; Kimitsune Ishizaki; Johannes Hohlbein; Jan W. Borst; D. Roeland Boer; Ryuichi Nishihama; Takayuki Kohchi; Dolf Weijers, Nat. Plants, 6, 473 - 482, 2020
DOI: 10.1038/s41477-020-0662-y.
[113] Flowering time control in rice by introducing Arabidopsis clock-associated PSEUDO-RESPONSE REGULATOR 5,
Nakamichi N; Kudo T; Makita N; Kiba T; Kinoshita T; Sakakibara H, Biosci Biotechnol Biochem., 84, 970 - 979, 2020
DOI: 10.1080/09168451.2020.1719822.
[112] The Maize Hairy Sheath Frayed1 (Hsf1) Mutation Alters Leaf Patterning through Increased Cytokinin Signaling,
Muszynski MG; Moss-Taylor L; Chudalayandi S; Cahill J; Del Valle-Echevarria AR; Alvarez-Castro I; Petefish A; Sakakibara H; Krivosheev DM; Lomin SN; Romanov GA; Thamotharan S; Dam T; Li B; Brugière N, Plant Cell, 32, 1501 - 1518, 2020
DOI: 10.1105/tpc.19.00677.
[111] Negative roles of strigolactone-related SMXL6, 7 and 8 proteins in drought resistance in Arabidopsis,
Weiqiang Li; Kien Huu Nguyen; Cuong Duy Tran; Yasuko Watanabe; Chunjie Tian; Xiaojian Yin; Kun Li; Yong Yang; Jinggong Guo; Yuchen Miao; Shinjiro Yamaguchi; Lam-Son Phan Tran, Biomolecules, 10, 4, 607, 2020
DOI: 10.3390/biom10040607.
[110] Chemical identification of 18-hydroxycarlactonoic acid as an LjMAX1 product and in planta conversion of its methyl ester to canonical and non-canonical strigolactones in Lotus japonicus,
Narumi Mori; Aika Sado; Xiaonan Xie; Kaori Yoneyama; Kei Asami; Yoshiya Seto; Takahito Nomura; Shinjiro Yamaguchi; Koichi Yoneyama; Kohki Akiyama, Phytochemistry, 174, 112349, 2020
DOI: 10.1038/s41598-020-74281-9.
[109] Positional cues regulate dorsal organ formation in the liverwort Marchantia polymorpha,
Hidemasa Suzuki; C. Jill Harrison; Masaki Shimamura; Takayuki Kohchi; Ryuichi Nishihama, J. Plant Res., , 2020
DOI: 10.1007/s10265-020-01180-5.
[108] Arabidopsis ECHIDNA protein is involved in seed coloration, protein trafficking to vacuoles, and vacuolar biogenesis,
Takuji Ichino; Kazuki Maeda; Ikuko Hara-Nishimura; Tomoo Shimada, J. Exp. Bot., , 2020
DOI: 10.1093/jxb/eraa147.
[107] Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts,
Fay-Wei Li; Tomoaki Nishiyama; Manuel Waller; Eftychios Frangedakis; Jean Keller; Zheng Li; Noe Fernandez-Pozo; Michael S. Barker; Tom Bennett; Miguel A. Blázquez; Shifeng Cheng; Andrew C. Cuming; Jan de Vries; Sophie de Vries; Pierre-Marc Delaux; ...; Keiko Sakakibara; Péter Szövényi , Nat. Plants, 6, 259 - 272, 2020
DOI: 10.1038/s41477-020-0618-2.
[106] Comparative functional analyses of DWARF14 and KARRIKIN INSENSITIVE 2 in drought adaptation of Arabidopsis thaliana,
Weiqiang Li; Kien Huu Nguyen; Ha Duc Chu; Yasuko Watanabe; Yuriko Osakabe; Mayuko Sato; Kiminori Toyooka; Mitsunori Seo; Lei Tian; Chunjie Tian; Shinjiro Yamaguchi; Maho Tanaka; Motoaki Seki; Lam‐Son Phan Tran, PLANT J., 103, 1, 111 - 127, 2020
DOI: 10.1111/tpj.14712.
[105] Genome-wide responses to shoot nitrate satiety are attenuated by external ammonium in Arabidopsis thaliana,
Hachiya, T; Okamoto, Y; Watanabe, M; Takebayashi, Y; Kojima, M; Suzuki, T; Sakakibara, H, Soil Sci. Plant Nutr., 66, 317 - 327, 2020
DOI: 10.1080/00380768.2020.1717905.
[104] The rhizobial autotransporter determines the symbiotic nitrogen fixation activity of Lotus japonicus in a host-specific manner,
Yoshikazu Shimoda; Yuki Nishigaya; Hiroko Yamaya-Ito; Noritoshi Inagaki; Yosuke Umehara; Hideki Hirakawa; Shusei Sato; Toshimasa Yamazaki; Makoto Hayashi, Proc. Natl. Acad. Sci. USA, 117, 3, 1806 - 1815, 2020
DOI: 10.1073/pnas.1913349117.
[103] Structural and functional relationships between plasmodesmata and plant endoplasmic reticulum-plasma membrane contact sites consisting of three synaptotagmins,
Kazuya Ishikawa; Kentaro Tamura; Yoichiro Fukao; Tomoo Shimada, New Phytol., , 2020
DOI: 10.1111/nph.16391.
[102] Regulation of photosynthetic carbohydrate metabolism by a Raf-like kinase in the liverwort Marchantia polymorpha,
Eri Koide; Noriyuki Suetsugu; Megumi Iwano; Eiji Goto; Yuko Nomura; Sara C. Stolze; Hirofumi Nakagami; Takayuki Kohchi; Ryuichi Nishihama, Plant Cell Physiol., 61, 3, 631 - 643, 2020
DOI: 10.1093/pcp/pcz232.
[101] Regulation of the poly(A) status of mitochondrial mRNA by poly(A) specific ribonuclease is conserved among land plants,
Mai Kanazawa; Yoko Ikeda; Ryuichi Nishihama; Shohei Yamaoka; Nam Hee Lee; Katsuyuki T. Yamato; Takayuki Kohchi; Takashi Hirayama, Plant Cell Physiol., 61, 3, 470 - 480, 2020
DOI: 10.1093/pcp/pcz212.
[100] Isolation of natural fungal pathogens from Marchantia polymorpha reveals antagonism between salicylic acid and jasmonate during liverwort-fungus interactions,
Hidenori Matsui; Hidekazu Iwakawa; Gang-Su Hyon; Izumi Yotsui; Shinpei Katou; Isabel Monte; Ryuichi Nishihama; Rainer Franzen; Roberto Solano; Hirofumi Nakagami, Plant Cell Physiol., 61, 2, 265 - 275, 2020
DOI: 10.1093/pcp/pcz187.
[99] Evolution and diversity of the wild rice Oryza officinalis complex, across continents genome types, and ploidy levels.,
Matt Shenton; Masaaki Kobayashi; Shin Terashima; Hajime Ohyanagi; Dario Copetti; Tania Hernández-Hernández; Jianwei Zhang; Nobuko Ohmido; Masahiro Fujita; Atsushi Toyoda; Hiroshi Ikawa; Takahiko Kubo; David Kudrna; Rod Wing; Kentaro Yano; Ken-ichi Nonomura; Yutaka Sato; Nori Kurata, Genome Biology and Evolution, 12, 4, 413 - 428, 2020
DOI: 10.1093/gbe/evaa037.
[98] Adaptive reduction of male gamete number in the selfing plant Arabidopsis thaliana,
Takashi Tsuchimatsu; Hiroyuki Kakui; Misako Yamazaki; Cindy Marona; Hiroki Tsutsui; Afif Hedhly; Dazhe Meng; Yutaka Sato; Thomas Städler; Ueli Grossniklaus; Masahiro Kanaoka; Michael Lenhard; Magnus Nordborg; Kentaro K Shimizu, Nat. Commun., 11, 2885, 2020
DOI: 10.1038/s41467-020-16679-7.
[97] Agrobacterium-mediated genetic transformation of wild Oryza species using immature embryos,
Sae Shimizu-Sato; Katsutoshi Tsuda; Misuzu Nosaka-Takahashi; Toshiya Suzuki; Seijiro Ono; Nhung Kim Ta; Yuri Yoshida; Ken-Ichi Nonomura; Yutaka Sato, RICE, 13, 33, 2020
DOI: 10.1186/s12284-020-00394-4.
[96] Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice,
Kaoru Tonosaki; Akemi Ono; Megumi Kunisada; Megumi Nishino; Hiroki Nagata; Shingo Sakamoto; Saku T. Kijima; Hiroyasu Furuumi; Ken-ichi Nonomura; Yutaka Sato; Masaru Ohme-Takagi; Masaki Endo; Luca Comai; Katsunori Hatakeyama; Taiji Kawakatsu; Tetsu Kinoshita, Plant Cell, , 2020
DOI: 10.1093/plcell/koaa006.
[95] Oral RNAi of diap1 results in rapid reduction of damage to potatoes in Henosepilachna vigintioctopunctata,
Yasuhiko Chikami; Haruka Kawaguchi; Takamasa Suzuki; Hirofumi Yoshioka; Yutaka Sato; Toshinobu Yaginuma; Teruyuki Niimi, Journal of Pest Science, , 2020
DOI: 10.1007/s10340-020-01276-w.

2019

[94] A conserved regulatory mechanism mediates the convergent evolution of plant shoot lateral organs,
Satoshi Naramoto; Victor A. S. Jones; Nicola Trozzi; Mayuko Sato; Kiminori Toyooka; Masaki Shimamura; Sakiko Ishida; Kazuhiko Nishitani; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; Liam Dolan; Junko Kyozuka, PLoS Biology, 17, 12, e3000560, 2019
DOI: 10.1371/journal.pbio.3000560.
[93] A shared gene drives lateral root development and root nodule symbiosis pathways in Lotus,
Takashi Soyano; Yoshikazu Shimoda; Masayoshi Kawaguchi; Makoto Hayashi, Science, 366, 6468, 1021 - 1023, 2019
DOI: 10.1126/science.aax2153.
[92] HIGH STEROL ESTER 1 is a key factor in plant sterol homeostasis,
Takashi L. Shimada; Tomoo Shimada; Yozo Okazaki; Yasuhiro Higashi; Kazuki Saito; Keiko Kuwata; Kaori Oyama; Misako Kato; Haruko Ueda; Akihiko Nakano; Takashi Ueda; Yoshitaka Takano; Ikuko Hara-Nishimura, Nat. Plants, 5, 1154 - 1166, 2019
DOI: 10.1038/s41477-019-0537-2.
[91] GEMMA CUP-ASSOCIATED MYB1, an Ortholog of Axillary Meristem Regulators, Is Essential in Vegetative Reproduction in Marchantia polymorpha,
Yukiko Yasui; Shigeyuki Tsukamoto; Tomomi Sugaya; Ryuichi Nishihama; Quan Wang; Hirotaka Kato; Katsuyuki T. Yamato; Hidehiro Fukaki; Tetsuro Mimura; Hiroyoshi Kubo; Klaus Theres; Takayuki Kohchi; Kimitsune Ishizaki, Curr. Biol., 29, 23, 3987 - 3995, 2019
DOI: 10.1016/j.cub.2019.10.004.
[90] Histone acetylation orchestrates wound-induced transcriptional activation and cellular reprogramming in Arabidopsis,
Bart Rymen; Ayako Kawamura; Alice Lambolez; Soichi Inagaki; Arika Takebayashi; Akira Iwase; Yuki Sakamoto; Kaori Sako; David S. Favero; Momoko Ikeuchi; Takamasa Suzuki; Motoaki Seki; Tetsuji Kakutani; François Roudier; Keiko Sugimoto, Communications Biology, 2, 404, 2019
DOI: doi:10.1038/s42003-019-0646-5.
[89] A versatile microfluidic device for highly inclined thin illumination microscopy in the moss Physcomitrella patens.,
Elena Kozgunova; Gohta Goshima, Sci Rep, 9, 1, 15182, 2019
DOI: 10.1038/s41598-019-51624-9.
[88] The RopGEF KARAPPO is Essential for the Initiation of Vegetative Reproduction in Marchantia polymorpha,
Takuma Hiwatashi; Honzhen Goh; Yukiko Yasui; Li Quan Koh; Hideyuki Takami; Masataka Kajikawa; Hiroyuki Kirita; Takehiko Kanazawa; Naoki Minamino; Taisuke Togawa; Mayuko Sato; Mayumi Wakazaki; Katsushi Yamaguchi; Shuji Shigenobu; Hidehiro Fukaki; Tetsuro Mimura; Kiminori Toyooka; Kimitsune Ishizaki, Curr. Biol., 29, 20, 3525 - 3531, 2019
DOI: 10.1016/j.cub.2019.08.071.
[87] SNARE Proteins LjVAMP72a and LjVAMP72b Are Required for Root Symbiosis and Root Hair Formation in Lotus japonicus,
Aoi Sogawa; Akihiro Yamazaki; Hiroki Yamasaki; Misa Komi; Tomomi Manabe; Shigeyuki Tajima; Makoto Hayashi; Mika Nomura, Front. Plant Sci., 9, 1992, 2019
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[86] Genome Sequence of Striga asiatica Provides Insight into the Evolution of Plant Parasitism,
Satoko Yoshida; Seungil Kim; Eric K. Wafula; Jaako Tanskanen; Yong-Min Kim; Loren Honaas; Zhenzhen Yang; Thomas Spallek; Caitlin E. Conn; Yasunori Ichihashi; Kyeongchae Cheong; Songkui Cui; Joshua P. Der; Heidrun Gundlach; Yuannian Jiao; Chiaki Hori; Juliane K. Ishida; 26 more authors, Curr. Biol., 29, 18, 3041 - 3052, 2019
DOI: https://doi.org/10.1016/j.cub.2019.07.086.
[85] Moss Kinesin-14 KCBP accelerates chromatid motility in anaphase,
Mari W. Yoshida; Moé Yamada; Gohta Goshima, Cell Struct Funct., 44, 2, 95 - 104, 2019
DOI: 10.1247/csf.19015.
[84] Cytokinin signaling coordinates development of diverse organs in Marchantia polymorpha,
Shiori S. Aki; Ryuichi Nishihama; Takayuki Kohchi; Masaaki Umeda, Plant Signal Behav., 14, 11, 1668232, 2019
DOI: 10.1080/15592324.2019.1668232.
[83] ERN1 and CYCLOPS coordinately activate NIN signaling to promote infection thread formation in Lotus japonicus,
Meng Liu; Takashi Soyano; Koji Yano; Makoto Hayashi; Masayoshi Kawaguchi, J. Plant Res., 132, 5, 641 - 653, 2019
DOI: 10.1007/s10265-019-01122-w.
[82] Identification of 15 new bypassable essential genes of fission yeast,
Aoi Takeda; Shigeaki Saitoh; Hiroyuki Ohkura; Kenneth E. Sawin; Gohta Goshima, Cell Struct Funct., 44, 2, 113 - 119, 2019
DOI: 10.1247/csf.19025.
[81] Transient cotransformation of CRISPR/Cas9 and oligonucleotide templates enables efficient editing of target loci in Physcomitrella patens.,
Peishan Yi; Gohta Goshima, Plant Biotechnol. J., 18, 3, 599 - 601, 2019
DOI: 10.1111/pbi.13238.
[80] Physcomitrella STEMIN transcription factor induces stem cell formation with epigenetic reprogramming.,
Masaki Ishikawa; Mio Morishita; Yohei Higuchi; Syunsuke Ichikawa; Takaaki Ishikawa; Tomoaki Nishiyama; Yukiko Kabeya; Yuji Hiwatashi; Tetsuya Kurata; Minoru Kubo; Shuji Shigenobu; Yosuke Tamada; Yoshikatsu Sato; Mitsuyasu Hasebe, Nat. Plants, 5, 681 - 690, 2019
DOI: 10.1038/s41477-019-0464-2.
[79] Specification of the basal region identity after asymmetric zygotic division requires mitogen-activated protein kinase 6 in rice.,
Kiyoe Ishimoto; Shino Sonohara; Mitsuko Kishi-Koboshi; Jun-ichi Itoh; Ken-ichiro Hibara; Yutaka Sato; Akio Miyao; Misuzu Nosaka-Takahashi; Toshiya Suzuki; Nhung Kim Ta; Sae Shimizu-Sato; Takamasa Suzuki; Atsushi Toyoda; Hirokazu Takahashi; Mikio Nakazono; Yasuo Nagato; Hirohiko Hirochika; Yutaka Sato, Development, 146, dev176305, 2019
DOI: 10.1242/dev.176305.
[78] Cytokinin signaling is essential for organ formation in Marchantia polymorpha,
Shiori S Aki; Tatsuya Mikami; Satoshi Naramoto; Ryuichi Nishihama; Kimitsune Ishizaki; Mikiko Kojima; Yumiko Takebayashi; Hitoshi Sakakibara; Junko Kyozuka; Takayuki Kohchi; Masaaki Umeda, Plant Cell Physiol., 60, 8, 1842 - 1754, 2019
DOI: 10.1093/pcp/pcz100.
[77] Cytokinin Signaling Is Essential for Organ Formation in Marchantia polymorpha,
Shiori S. Aki; Tatsuya Mikami; Satoshi Naramoto; Ryuichi Nishihama; Kimitsune Ishizaki; Mikiko Kojima; Yumiko Takebayashi; Hitoshi Sakakibara; Junko Kyozuka; Takauki Kohchi; Masaaki Umeda, Plant Cell Physiol., 60, 8, 1842 - 1854, 2019
DOI: 10.1093/pcp/pcz100.
[76] Biogenesis of leaf endoplasmic reticulum body is regulated by both jasmonate-dependent and independent pathways,
Akiko Nakazaki; Kenji Yamada; Tadashi Kunieda; Kentaro Tamura; Ikuko Hara-Nishimura; Tomoo Shimada, Plant Signal Behav., 14, 8, 1622982, 2019
DOI: 10.1080/15592324.2019.1622982.
[75] An efficient DNA- and selectable-marker-free genome-editing system using zygotes in rice,
Erika Toda ; Narumi Koiso; Arika Takebayashi; Masako Ichikawa; Takatoshi Kiba; Keishi Osakabe; Yuriko Osakabe; Hitoshi Sakakibara; Norio Kato, Nat. Plants, , 2019
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[74] Reactive Oxygen Species (ROS) Generation Is Indispensable for Haustorium Formation of the Root Parasitic Plant Striga hermonthica,
Syogo Wada; Songkui Cui; Satoko Yoshida, Front. Plant Sci., , 2019
DOI: https://doi.org/10.3389/fpls.2019.00328.
[73] Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation,
Minoru Kubo ; Tomoaki Nishiyama; Yosuke Tamada; Ryosuke Sano; Masaki Ishikawa ; Takashi Murata; Akihiro Imai; Daniel Lang; Taku Demura; Ralf Reski ; Mitsuyasu Hasebe, Nucleic Acids Research, , 2019
DOI: 10.1093/nar/gkz181.
[72] Developmental analysis of the early steps in strigolactone-mediated axillary bud dormancy in rice.,
Le Luo; Megumu Takahashi; Hiromu Kameoka; Ruyi Qin; Toshihide Shiga; Yuri Kanno; Mitsunori Seo; Masaki Ito; Guohua Xu; Junko Kyozuka, PLANT J., 97, 6, 1006 - 1021, 2019
DOI: 10.1111/tpj.14266.
[71] Control of proliferation in the haploid meristem by CLE peptide signaling in Marchantia polymorpha.,
Yuki Hirakawa; Naoyuki Uchida; Yasuka L. Yamaguchi; Ryo Tabata; Sakiko Ishida; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; Shinichiro Sawa; John L. Bowman, PLoS Genetics, 15, 3, 1 - 20, 2019
DOI: 10.1371/journal.pgen.1007997.
[70] Kinetochore protein depletion underlies cytokinesis failure and somatic polyploidization in the moss Physcomitrella patens,
Elena Kozgunova; Momoko Nishina; Gohta Goshima, eLife, e43652, , 2019
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[69] Reproductive induction is a far-red high irradiance response that is mediated by phytochrome and PHYTOCHROME INTERACTING FACTOR in Marchantia polymorpha,
Keisuke Inoue; Ryuichi Nishihama; Takashi Araki; Takayuki Kohchi, Plant Cell Physiol., 60, 5, 1136 - 1145, 2019
DOI: 10.1093/pcp/pcz029.
[68] A single JAZ repressor controls the jasmonate pathway in Marchantia polymorpha,
Isabel Monte; José M. Franco-Zorrilla; Gloria García-Casado; Angel M. Zamarreño; José M. García-Mina; Ryuichi Nishihama; Takayuki Kohchi; Roberto Solano, Mol Plant, 12, 2, 185 - 198, 2019
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[67] Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens,
Marco Burger; Kiyoshi Mashiguchi; Hyun Jee Lee; Misaki Nakano; Kodai Takemoto; Yoshiya Seto; Shinjiro Yamaguchi; Joanne Chory, Cell Rep., 26, 4, 855 - 865, 2019
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[66] Physiological function of photoreceptor UVR8 in UV-B tolerance in the liverwort Marchantia polymorpha,
Youichi Kondou; Yuta Miyagi; Takeshi Morito; Kenta Fujihira; Wataru Miyauchi; Asami Moriyama; Takuya Terasawa; Sakiko Ishida; Kosei Iwabuchi; Hiroyoshi Kubo; Ryuichi Nishihama; Kimitsune Ishizaki; Takayuki Kohchi, Planta, 1 - 16, 2019
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[65] Strigolactone perception and deactivation by a hydrolase receptor DWARF14,
Yoshiya Seto; Rei Yasui; Hiromu Kameoka; Muluneh Tamiru; Mengmeng Cao; Ryohei Terauchi; Akane Sakurada; Rena Hirano; Takaya Kisugi; Atsushi Hanada; Mikihisa Umehara; Eunjoo Seo; Kohki Akiyama; Jason Burke; Noriko Takeda-Kamiya; Weiqiang Li; Yoshinori Hirano; et al., Nat. Commun., 10, 191, 2019
DOI: 10.1038/s41467-018-08124-7.
[64] Chemical screening of novel strigolactone agonists that specifically interact with DWARF14 protein,
Rei Yasui; Yoshiya Seto; Shinsaku Ito; Kojiro Kawada; Kaori Itto-Nakama; Kiyoshi Mashiguchi; Shinjiro Yamaguchi, Bioorg Med Chem Lett., 29, 7, 938 - 942, 2019
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[63] A cis‐acting bidirectional transcription switch controls sexual dimorphism in the liverwort,
Tetsuya Hisanaga; Keitaro Okahashi; Shohei Yamaoka; Tomoaki Kajiwara; Ryuichi Nishihama; Masaki Shimamura; Katsuyuki T. Yamato; John L Bowman; Takayuki Kohchi; Keiji Nakajima, EMBO J., e100240, 2019
DOI: 10.15252/embj.2018100240.
[62] The structural integrity of lignin is crucial for resistance against Striga hermonthica parasitism in rice,
J Musembi Mutuku; Songkui Cui; Chiaki Hori; Yuri Takeda; Yuki Tobimatsu; Ryo Nakabayashi; Tetsuya Mori; Kazuki Saito; Taku Demura; Toshiaki Umezawa; Satoko Yoshida; Ken Shirasu, Plant Physiol., , 2019
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[61] Abscisic acid acts as a regulator of molecular trafficking through plasmodesmata in the moss Physcomitrella patens,
Munenori Kitagawa; Takumi Tomoi; Tomoki Fukushima; Yoichi Sakata; Mayuko Sato; Kiminori Toyooka; Tomomichi Fujita; Hitoshi Sakakibara, Plant Cell Physiol., 60, 4, , 2019
DOI: 10.1093/pcp/pcy249.
[60] RNAi of the sesquiterpene cyclase gene for phytoalexin production impairs pre- and postinvasive resistance to potato blight pathogens,
Miki Yoshioka; Ayako Adachi; Yutaka Sato; Noriyuki Doke; Tatsuhiko Kondo; Hirofumi Yoshioka, Molecular Plant Pathology, 20, 7, 907 - 922, 2019
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[59] Diel O2 Dynamics in Partially and Completely Submerged Deepwater Rice: Leaf Gas Films Enhance Internodal O2 Status, Influence Gene Expression and Accelerate Stem Elongation for ‘Snorkelling’ during Submergence,
Mori Y.; Kurokawa Y.; Koike M.; Malik A.I.; Colmer T.D.; Ashikari M.; Pedersen O; Nagai K., Plant Cell Physiol., 60, 5, 973 - 985, 2019
DOI: 10.1093/pcp/pcz009.
[58] Affinity-based high-resolution analysis of DNA binding by VASCULAR-RELATED NAC-DOMAIN7 via fluorescence correlation spectroscopy,
Taizo Tamura; Hitoshi Endo; Atsunobu Suzuki; Yutaka Sato; Ko Kato; Misato Ohtani; Masatoshi Yamaguchi; Taku Demura, PLANT J., , 2019.
[57] Leaf Endoplasmic Reticulum Bodies Identified in Arabidopsis Rosette Leaves Are Involved in Defense against Herbivory,
Akiko Nakazaki; Kenji Yamada; Tadashi Kunieda; Ryosuke Sugiyama; Masami Yokota Hirai; Kentaro Tamura; Ikuko Hara-Nishimura; Tomoo Shimada, Plant Physiol., 179, 4, 1515 - 1524, 2019
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[56] Polar Localization of the Borate Exporter BOR1 Requires AP2-Dependent Endocytosis,
Akira Yoshinari; Takuya Hosokawa; Taro Amano; Marcel Pascal Beier; Tadashi Kunieda; Tomoo Shimada; Ikuko Hara-Nishimura; Satoshi Naito; Junpei Takano, Plant Physiol., 179, 4, 1569 - 1580, 2019
DOI: 10.1104/pp.18.01017.
[55] Identification of Periplasmic Root-Cap Mucilage in Developing Columella Cells of Arabidopsis thaliana,
Kazuki Maeda; Tadashi Kunieda; Kentaro Tamura; Kyoko Hatano; Ikuko Hara-Nishimura; Tomoo Shimada, Plant Cell Physiol., 60, 6, 1296 - 1303, 2019
DOI: 10.1093/pcp/pcz047.
[54] Kinase activity-dependent stability of calcium/calmodulin-dependent protein kinase of Lotus japonicus,
Yoshikazu Shimoda; Haruko Imaizumi-Anraku; Makoto Hayashi, Planta, 250, 5, 1773 - 1779, 2019
DOI: 10.1007/s00425-019-03264-6.

2018

[53] Ethylene-Gibberellin Signaling Underlies Adaptation of Rice to Periodic Flooding.,
Takeshi Kuroha; Keisuke Nagai; Rico Gamuyao; Diane R. Wang; Tomoyuki Furuta; Masanari Nakamori; Takuya Kitaoka; Keita Adachi; Anzu Minami; Yoshinao Mori; Kiyoshi Mashiguchi; Yoshiya Seto; Shinjiro Yamaguchi; Mikiko Kojima; Hitoshi Sakakibara; Jianzhong Wu; Kaworu Ebana; Motoyuki Ashikari et al., Science, 361, 6398, 181 - 186, 2018
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[52] Rice leaf hydrophobicity and gas films are conferred by a wax synthesis gene (LGF1) and contribute to flood tolerance.,
Yusuke Kurokawa; Keisuke Nagai; Phung Danh Huan ; Kousuke Shimazaki ; Huangqi Qu; Yoshinao Mori; Yosuke Toda; Takeshi Kuroha; Nagao Hayashi; Saori Aiga; Jun‐ichi Itoh; Atsushi Yoshimura; Yuko Sasaki‐Sekimoto; Hiroyuki Ohta; Mie Shimojima; Al Imran Malik; Ole Pedersen; Motoyuki Ashikari et al., New Phytol., 218, 4, 1558 - 1569, 2018
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[51] Time-Course Transcriptomics Analysis Reveals Key Responses of Submerged Deepwater Rice to Flooding,
Anzu Minami; Kenji Yano; Rico Ledesma Gamuyao; Keisuke Nagai ; Takeshi Kuroha; Madoka Ayano; Masanari Nakamori; Masaya Koike; Yuma Kondo; Yoko Niimi; Keiko Kuwata; Takamasa Suzuki; Tetsuya Higashiyama; Yumiko Takebayashi; Mikiko Kojima; Hitoshi Sakakibara; Motoyuki Ashikari; Stefan Reuscher et al., Plant Physiol., , 2018
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[50] Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants,
Asuka Higo; Tomokazu Kawashima; Michael Borg; Mingmin Zhao; Irene López-Vidriero; Hidetoshi Sakayama; Sean A. Montgomery; Hiroyuki Sekimoto; Dieter Hackenberg; Masaki Shimamura; 他8名; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; José M. Franco-Zorrilla; David Twell; Frédéric Berger; Takashi Araki, Nat. Commun., 9, 5283, 2018
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[49] Drosophila kinesin-8 stabilizes the kinetochore–microtubule interaction,
Tomoya Edzuka; Gohta Goshima, J. Cell Biol., 218, 2, 474 - 488, 2018
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[48] An evolutionary conserved abscisic acid signaling pathway regulates dormancy in the liverwort Marchantia polymorpha,
D. Magnus Eklund; Masakazu Kanei; Eduardo Flores-Sandova; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; Ulf Lagercrantz; Rishikesh P. Bhalerao; Yoichi Sakata; John L. Bowman, Curr. Biol., 28, 22, 3691 - 3699, 2018
DOI: 10.1016/j.cub.2018.10.018.
[47] Subcellular localisation of an endoplasmic reticulum-plasma membrane tethering factor, SYNAPTOTAGMIN 1, is affected by fluorescent protein fusion,
Kazuya Ishikawa; Kentaro Tamura; Tomoo Shimada, Plant Signal Behav., , 2018
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[46] Efficient CRISPR/Cas9-based genome editing and its application to conditional genetic analysis in Marchantia polymorpha,
Shigeo S. Sugano; Ryuichi Nishihama; Makoto Shirakawa; Junpei Takagi; Yoriko Matsuda; Sakiko Ishida; Tomoo Shimada; Ikuko Hara-Nishimura; Keishi Osakabe; Takayuki Kohchi, PLOS ONE, 13, 10, e0205117, 2018
DOI: 10.1371/journal.pone.0205117.
[45] Shoot nitrate underlies a perception of nitrogen satiety to trigger local and systemic signaling cascades in Arabidopsis thaliana,
Yuki Okamoto; Takamasa Suzuki; Daisuke Sugiura; Takatoshi Kiba; Hitoshi Sakakibara; Takushi Hachiya, Soil Science and Plant Nutrition, 65, 1, 56 - 64, 2018
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[44] Novel gateway binary vectors for rapid tripartite DNA assembly and promoter analysis with various reporters and tags in the liverwort Marchantia polymorpha,
Shoji Mano; Ryuichi Nishihama; Sakiko Ishida; Kazumi Hikino; Maki Kondo; Mikio Nishimura; Katsuyuki T. Yamato; Takayuki Kohchi; Tsuyoshi Nakagawa, PLOS ONE, 13, 10, e0204964, 2018
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[43] ANGUSTIFOLIA contributes to the regulation of three-dimensional morphogenesis in the liverwort Marchantia polymorpha,
Tomoyuki Furuya; Koro Hattori; Yoshitaka Kimori; Sakiko Ishida; Ryuichi Nishihama; Takayuki Kohchi; Hirokazu Tsukaya, Development, 145, dev161398, 2018
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[42] Low Infection of Phelipanche aegyptiaca in Micro-Tom Mutants Deficient in CAROTENOIDCLEAVAGE DIOXYGENASE 8,
Shoko Hasegawa; Takuya Tsutsumi; Shunsuke Fukushima; Yoshihiro Okabe; Junna Saito; Mina Katayama; Masato Shindo; Yusuke Yamada; Koichiro Shimomura; Kaori Yoneyama; Kohki Akiyama; Koh Aoki; Tohru Ariizumi; Hiroshi Ezura; Shinjiro Yamaguchi; Mikihisa Umehara, Int J Mol Sci., 19, 9, E2645, 2018
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[41] Synaptotagmin-Associated Endoplasmic Reticulum-Plasma Membrane Contact Sites Are Localized to Immobile ER Tubules,
Kazuya Ishikawa; Kentaro Tamura; Haruko Ueda; Yoko Ito; Akihiko Nakano; Ikuko Hara-Nishimura; Tomoo Shimada, Plant Physiol., 178, 641 - 653, 2018
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[40] Loss of CG methylation in Marchantia polymorpha causes disorganization of cell division and reveals unique DNA methylation regulatory mechanisms of non-CG methylation,
Yoko Ikeda; Ryuichi Nishihama; Shohei Yamaoka; Mario A Arteaga-Vazquez; Adolfo Aguilar-Cruz; Daniel Grimanelli; Romain Pogorelcnik; Robert A Martienssen; Katsuyuki T Yamato; Takayuki Kohchi; Takashi Hirayama; Olivier Mathieu, Plant Cell Physiol., 59, 12, 2421 - 2431, 2018
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[39] The AP-1 Complex is Required for Proper Mucilage Formation in Arabidopsis Seeds,
Tomoo Shimada; Tadashi Kunieda; Sakura Sumi; Yasuko Koumoto; Kentaro Tamura; Kyoko Hatano; Haruko Ueda; Ikuko Hara-Nishimura, Plant Cell Physiol., , 2018
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[38] Cryopreservation of Marchantia polymorpha spermatozoa,
Taisuke Togawa; Tohru Adachi; Daijiro Harada; Tasuku Mitani; Daisuke Tanaka; Kimitsune Ishizaki; Takayuki Kohchi; Katsuyuki T. Yamato, J. Plant Res., 131, 6, 1047 - 1054, 2018
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[37] WIND1 induces dynamic metabolomic reprogramming during regeneration in Brassica napus,
Akira Iwase; Kento Mita; David S.Favero; Nobutaka Mitsuda; Ryosuke Sasaki; Makoto Kobayshi; Yumiko Takebayashi; Mikiko Kojima; Miyako Kusano; Akira Oikawa; Hitoshi Sakakibara; Kazuki Saito; Jun Imamura; Keiko Sugimoto, Dev. Biol., 442, 1, 40 - 52, 2018
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[36] Endoplasmic Reticulum (ER) Membrane Proteins (LUNAPARKs) are Required for Proper Configuration of the Cortical ER Network in Plant Cells,
Haruko Ueda; Natsumi Ohta; Yoshitaka Kimori; Teruka Uchida; Tomoo Shimada; Kentaro Tamura; Ikuko Hara-Nishimura, Plant Cell Physiol., 59, 10, 1931 - 1941, 2018
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[35] An allelic series at the KARRIKIN INSENSITIVE2 locus of Arabidopsis thaliana decouples ligand hydrolysis and receptor degradation from downstream signalling,
Jiaren Yao; Kiyoshi Mashiguchi; Adrian Scaffidi; Tomoki Akatsu; Kim T. Melville; Ryo Morita; Yu Morimoto; Steven M. Smith; Yoshiya Seto; Gavin R. Flematti; Shinjiro Yamaguchi; Mark T. Waters, PLANT J., 96, 1, 75 - 89, 2018
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[34] Growth‐ and stress‐related defects associated with wall hypoacetylation are strigolactone‐dependent,
Vicente Ramírez; Guangyan Xiong; Kiyoshi Mashiguchi; Shinjiro Yamaguchi; Markus Pauly, Plant Direct, 2, 6, e00062, 2018
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[33] The KCH Kinesin Drives Nuclear Transport and Cytoskeletal Coalescence to Promote Tip Cell Growth in Physcomitrella patens,
Moé Yamada; Gohta Goshima, Plant Cell, 30, 7, 1496 - 1510, 2018
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[32] Biosynthesis of riccionidins and marchantins is regulated by R2R3-MYB transcription factors in Marchantia polymorpha,
Hiroyoshi Kubo; Shunsuke Nozawa; Takuma Hiwatashi; Youichi Kondou; Ryo Nakabayashi; Tetsuya Mori; Kazuki Saito; Kojiro Takanashi; Takayuki Kohchi; Kimitsune Ishizaki, Journal of Plant Research, 131, 5, 849 - 864, 2018
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[31] WUSCHEL-RELATED HOMEOBOX4 acts as a key regulator in early leaf development in rice,
Yukiko Yasui; Yoshihiro Ohmori; Yumiko Takebayashi; Hitoshi Sakakibara; Hiro-Yuki Hirano, PLOS Genetics, 14, 4, , 2018
DOI: 10.1371/journal.pgen.1007365.
[30] Upregulation of DWARF27 is associated with increased strigolactone levels under sulfur deficiency in rice,
Masato Shindo; Koichiro Shimomura; Shinjiro Yamaguchi; Mikihisa Umehara, Plant Direct, 2, 4, e00050, 2018
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[29] A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis,
Yoshie Maeda; Mineko Konishi; Takatoshi Kiba; Yasuhito Sakuraba; Naoya Sawaki; Tomohiro Kurai; Yoshiaki Ueda; Hitoshi Sakakibara; Shuichi Yanagisawa, Nat. Commun., 9, 1376, 1 - 14, 2018
DOI: 10.1038/s41467-018-03832-6.
[28] Ligand-receptor co-evolution shaped the jasmonate pathway in land plants.,
Isabel Monte; Sakiko Ishida; Angel M. Zamarreño; Mats Hamberg; José M. Franco-Zorrilla; Gloria García-Casado; Caroline Gouhier-Darimont; Philippe Reymond; Kosaku Takahashi; José M. García-Mina; Ryuichi Nishihama; Takayuki Kohchi; Roberto Solano, Nat. Chem. Biol., 14, 5, 480 - 488, 2018
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[27] Repression of nitrogen-starvation responses by members of the Arabidopsis GARP-type transcription factor NIGT1/HRS1 subfamily.,
Takatoshi Kiba; Jun Inaba; Toru Kudo; Nanae Ueda; Mineko Konishi; Nobutaka Mitsuda; Yuko Takiguchi; Youichi Kondou; Takeshi Yoshizumi; Masaru Ohme-Takagi; Minami Matsui; Kentaro Yano; Shuichi Yanagisawa; Hitoshi Sakakibara, Plant Cell, 30, 4, 925 - 945, 2018
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[26] Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica,
Songkui Cui; Syogo Wada; Yuki Tobimatsu; Yuri Takeda; Simon B Saucet; Toshiyuki Takano; Yoshiaki Umezawa; Ken Shirasu; Satoko Yoshida, New Phytol., 218, 2, 710 - 723, 2018
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[25] SPIRAL2 Stabilises Endoplasmic Microtubule Minus Ends in the Moss Physcomitrella patens.,
Shu Yao Leong; Moé Yamada; Naoki Yanagisawa; Gohta Goshima, Cell Struct Funct., 43, 1, 53 - 60, 2018
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[24] SlLAX1 is required for normal leaf development mediated by balanced adaxial and abaxial pavement cell growth in tomato,
Sri Imriani Pulungan; Ryoichi Yano; Yoshihiro Okabe; Takuji Ichino; Mikiko Kojima; Yumiko Takebayashi; Hitoshi Sakakibara; Tohru Ariizumi; Hiroshi Ezura, Plant Cell Physiol., 59, 6, 1170 - 1186, 2018
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[23] An evolutionarily conserved NIMA-related kinase directs rhizoid tip growth in the basal land plant Marchantia polymorpha,
Kento Otani; Kimitsune Ishizaki; Ryuichi Nishihama; Shogo Takatani; Takayuki Kohchi; Taku Takahashi; Hiroyasu Motose, Development, 145, 5, 1 - 11, 2018
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[22] Generative Cell Specification Requires Transcription Factors Evolutionarily Conserved in Land Plants,
Shohei Yamaoka; Ryuichi Nishihama; Yoshihiro Yoshitake; Sakiko Ishida; Keisuke Inoue; Misaki Saito; Keitaro Okahashi; Haonan Bao; Hiroyuki Nishida; Katsushi Yamaguchi; Shuji Shigenobu; Kimitsune Ishizaki; Katsuyuki T. Yamato; Takayuki Kohchi, Curr. Biol., 28, 479 - 486, 2018
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[21] The reduction in maize leaf growth under mild drought affects the transition between cell division and cell expansion and cannot be restored by elevated gibberellic acid levels,
Hilde Nelissen; Xiao-Huan Sun; Bart Rymen; Yusuke Jikumaru; Mikko Kojima; Yumiko Takebayashi; Rafael Abbeloos; Kirin Demuynck; Veronique Storme; Marnik Vuylsteke; Jolien De Block; Dorota Herman; Frederik Coppens; Steven Maere; Yuji Kamiya; Hitoshi Sakakibara; Gerrit T.S. Beemster; Dirk Inz, Plant Biotechnol. J., 16, 615 - 627, 2018
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[20] Variation in Splicing Efficiency Underlies Morphological Evolution in Capsella,
Ushio Fujikura; Runchun Jing; Atsushi Hanada; Yumiko Takebayashi; Hitoshi Sakakibara; Shinjiro Yamaguchi; Christian Kappe; Michael Lenhard, Dev. Cell, 44, 2, 192 - 203, 2018
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[19] Loss-of-function of ASPARTIC PEPTIDASE NODULE- INDUCED 1 (APN1) in Lotus japonicus restricts efficient nitrogen-fixing symbiosis with specific Mesorhizobium loti strains,
Hiroko Yamaya-Ito; Yoshikazu Shimoda; Tsuneo Hakoyama; Shusei Sato; Takakazu Kaneko; Md Shakhawat Hossain; Satoshi Shibata; Masayoshi Kawaguchi; Makoto Hayashi; Hiroshi Kouchi; Yosuke Umehara, PLANT J., 93, 1, 5 - 16, 2018
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[18] LEAF LATERAL SYMMETRY1, a Member of the WUSCHEL-RELATED HOMEOBOX3 Gene Family, Regulates Lateral Organ Development Differentially from Other Paralogs, NARROW LEAF2 and NARROW LEAF3 in Rice.,
Eriko Honda; Chow-Lih Yew; Takanori Yoshikawa; Yutaka Sato; Ken-ichiro Hibara; Jun-Ichi Itoh, Plant Cell Physiol., 59, 376 - 391, 2018
DOI: 10.1093/pcp/pcx196.

2017

[17] Top-down metabolomic approaches for nitrogen-containing metabolite,
Ryo Nakabayashi; Kei Hashimoto; Kiminori Toyooka; Kazuki Saito, Analytical Chemistry, 89, 5, 2698 - 2703, 2017
DOI: : 10.1021/acs.analchem.6b04163.
[16] The trans-Golgi network and the Golgi stacks behave independently during regeneration after Brefeldin A treatment in tobacco BY-2 cells,
Yoko Ito; Kiminori Toyooka; Masaru Fujimoto; Takashi Ueda; Tomohiro Uemura; Akihiko Nakano, Plant Cell Physiol., 58, 4, 811 - 821, 2017
DOI: : 10.1093/pcp/pcx028.
[15] Insights into land plant evolution gernered from the Marchantia polymorpha genome.,
John L. Bowman; Takayuki Kohchi; Katsuyuki T. Yamato; Jerry Jenkins; Shengqiang Shu; Kimitsune Ishizaki; Shohei Yamaoka; Ryuichi Nishihama; Yasukazu Nakamura; Frédéric Berger; Catherine Adam; Shiori Sugamata Aki; Felix Althoff; Takashi Araki; Mario A. Arteaga-Vazquez; Sureshkumar Balasubrmanian; Kerrie Barry; et al., Cell, 171, 2, 287 - 304, 2017
DOI: 10.1016/j.cell.2017.09.030.
[14] The role of the sole activator-type Auxin Response Factor in pattern formation of Marchantia polymorpha,
Hirotaka Kato; Masaru Kouno; Mayuko Takeda; Hidemasa Suzuki; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi, Plant Cell Physiol., 58, 10, 1642 - 1651, 2017
DOI: 10.1093/pcp/pcx095.
[13] Cytoplasmic MTOCs control spindle orientation for asymmetric cell division in plants,
Ken Kosetsu; Takashi Murata; Moé Yamada; Momoko Nishina; Joanna Boruc; Mitsuyasu Hasebe; Daniël Van Damme; Gohta Goshima, Proc. Natl. Acad. Sci. USA, 114, 42, E8847 - E8854, 2017
DOI: 10.1073/pnas.1713925114.
[12] Human microcephaly ASPM protein is a spindle pole-focusing factor that functions redundantly with CDK5RAP2,
Elsa A. Tungadi; Ami Ito; Tomomi Kiyomitsu; Gohta Goshima, J. Cell Sci., 130, 21, 3676 - 3684, 2017
DOI: 10.1242/jcs.203703.
[11] Inositol hexakis phosphate is the seasonal phosphorus reservoir in the deciduous woody plant Populus alba L.,
Yuko Kurita; Kei'ichi Baba; Miwa Ohnishi; Ryosuke Matsubara; Keiko Kosuge; Aya Anegawa; Chizuko Shichijo; Kimitsune Ishizaki; Yasuko Kaneko; Masahiro Hayashi; Toshinobu Suzaki; Hidehiro Fukaki; Tetsuro Mimura, Plant Cell Physiol., 58, 9, 1477 - 1485, 2017
DOI: 10.1093/pcp/pcx106.
[10] 14-3-3 regulation of Ncd reveals a new mechanism for targeting proteins to the spindle in oocytes,
Robin Beaven; Ricardo Nunes Bastos; Christos Spanos; Pierre Romé; C. Fiona Cullen; Juri Rappsilber; Régis Giet; Gohta Goshima; Hiroyuki Ohkura, J. Cell Biol., 216, 10, 3029 - 3039, 2017
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[9] Systemic transport of trans-zeatin and its precursor have differing roles in shoots of Arabidopsis,
Asami Osugi; Mikiko Kojima; Yumiko Takebayashi; Nanae Ueda; Takatoshi Kiba; Hitoshi Sakakibara, Nat. Plants, 3, 17112, 2017
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[8] DRP3 and ELM1 are required for mitochondrial fission in the liverwort Marchantia polymorpha,
Nagisa Nagaoka; Akihiro Yamashita; Rina Kurisu; Yuta Watari; Fumiko Ishizuna; Nobuhissro Tsutsumi; Kimitsune Ishizaki; Takayuki Kohchi; Shin-ichi Arimura, Sci Rep, 4, 4600, 2017
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[7] Land plants drive photorespiration as higher electron-sink: comparative study of post-illumination transient O2-uptake rates from liverworts to angiosperms through ferns and gymnosperms.,
Hitomi Hanawa; Kimitsune Ishizaki; Kana Nohira; Daisuke Takagi; Ginga Shimakawa; Takehiro Sejima; Keiichiro Shaku; Amane Makino; Chikahiro Miyake, Physiol. Plant., 161, 1, 138 - 149, 2017
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[6] Diversity of strategies for escaping reactive oxygen species production within photosystem I among land plants: P700 oxidation system is prerequisite for alleviating photoinhibition in photosystem I.,
Daisuke Takagi; Kimitsune Ishizaki; Hitomi Hanawa; Tomohito Mabuchi; Ginga Shimakawa; Hiroshi Yamamoto; Chikahiro Miyake, Physiol. Plant., 161, 1, 56 - 74, 2017
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[5] Dynamic reorganization of the endomembrane system during spermatogenesis in Marchantia polymorpha,
Naoki Minamino; Takehiro Kanazawa; Ryuichi Nishihama; Katsuyuki T. Yamato; Kimitsune Ishizaki; Takayuki Kohchi; Akihiko Nakano; Takashi Ueda, J. Plant Res., 130, 3, 433 - 441, 2017
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[4] Multiple kinesin-14 family members drive microtubule minus end–directed transport in plant cells,
Moé Yamada; Yohko Tanaka-Takiguchi; Masahito Hayashi; Momoko Nishina; Gohta Goshima, J. Cell Biol., 216, 6, 1705 - 1714, 2017
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[3] Multiple kinesin-14 family members drive microtubule minus end–directed transport in plant cells,
Moé Yamada; Yohko Tanaka-Takiguchi; Masahito Hayashi; Momoko Nishina; Gohta Goshima, J. Cell Biol., 216, 6, 1705 - 1714, 2017
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[2] Regulation of Strigolactone Biosynthesis by Gibberellin Signaling,
Shinsaku Ito; Daichi Yamagami; Mikihisa Umehara; Atsushi Hanada; Satoko Yoshida; Yasuyuki Sasaki; Shunsuke Yajima; Junko Kyozuka; Miyako Ueguchi-Tanaka; Makoto Matsuoka; Ken Shirasu; Shinjiro Yamaguchi; Tadao Asami, Plant Physiol., 174, 2, 1250 - 1259, 2017
DOI: 10.1104/pp.17.00301.
[1] Occurrence of brassinosteroids in non-flowering land plants, liverwort, moss, lycophyte and fern,
Takao Yokota; Toshiyuki Ohnishi; Kyomi Shibata; Masashi Asahina; Takahito Nomura; Tomomichi Fujita; Kimitsune Ishizaki; Takayuki Kohchi, Phytochemistry, 136, 46 - 55, 2017
DOI: 10.1016/j.phytochem.2016.12.020.