新学術領域研「植物多能性幹細胞」

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研究成果(論文発表 A01班)

[すべて] [A01の成果] [A02の成果] 

2019

[36] A single JAZ repressor controls the jasmonate pathway in Marchantia polymorpha,
Isabel Monte; José M. Franco-Zorrilla; Gloria García-Casado; Angel M. Zamarreño; José M. García-Mina; Ryuichi Nishihama; Takayuki Kohchi; Roberto Solano, Mol Plant, 12, 2, 185 - 198, 2019
DOI: 10.1016/j.molp.2018.12.017.
[35] A cis-acting bidirectional transcription switch controls sexual dimorphism in the liverwort,
Tetsuya Hisanaga; Keitaro Okahashi; Shohei Yamaoka; Tomoaki Kajiwara; Ryuichi Nishihama; Masaki Shimamura; Katsuyuki T. Yamato; John L Bowman; Takayuki Kohchi; Keiji Nakajima, EMBO J., e100240, 2019
DOI: 10.15252/embj.2018100240.

2018

[34] Ethylene-Gibberellin Signaling Underlies Adaptation of Rice to Periodic Flooding.,
Takeshi Kuroha; Keisuke Nagai; Rico Gamuyao; Diane R. Wang; Tomoyuki Furuta; Masanari Nakamori; Takuya Kitaoka; Keita Adachi; Anzu Minami; Yoshinao Mori; Kiyoshi Mashiguchi; Yoshiya Seto; Shinjiro Yamaguchi; Mikiko Kojima; Hitoshi Sakakibara; Jianzhong Wu; Kaworu Ebana; Motoyuki Ashikari et al., Science, 361, 6398, 181 - 186, 2018
DOI: 10.1126/science.aat1577 .
[33] Rice leaf hydrophobicity and gas films are conferred by a wax synthesis gene (LGF1) and contribute to flood tolerance.,
Yusuke Kurokawa; Keisuke Nagai; Phung Danh Huan ; Kousuke Shimazaki ; Huangqi Qu; Yoshinao Mori; Yosuke Toda; Takeshi Kuroha; Nagao Hayashi; Saori Aiga; Jun‐ichi Itoh; Atsushi Yoshimura; Yuko Sasaki‐Sekimoto; Hiroyuki Ohta; Mie Shimojima; Al Imran Malik; Ole Pedersen; Motoyuki Ashikari et al., New Phytol., 218, 4, 1558 - 1569, 2018
DOI: 10.1111/nph.15070.
[32] Time-Course Transcriptomics Analysis Reveals Key Responses of Submerged Deepwater Rice to Flooding,
Anzu Minami; Kenji Yano; Rico Ledesma Gamuyao; Keisuke Nagai ; Takeshi Kuroha; Madoka Ayano; Masanari Nakamori; Masaya Koike; Yuma Kondo; Yoko Niimi; Keiko Kuwata; Takamasa Suzuki; Tetsuya Higashiyama; Yumiko Takebayashi; Mikiko Kojima; Hitoshi Sakakibara; Motoyuki Ashikari; Stefan Reuscher et al., Plant Physiol., , 2018
DOI: 10.1104/pp.17.00858.
[31] Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants,
Asuka Higo; Tomokazu Kawashima; Michael Borg; Mingmin Zhao; Irene López-Vidriero; Hidetoshi Sakayama; Sean A. Montgomery; Hiroyuki Sekimoto; Dieter Hackenberg; Masaki Shimamura; 他8名; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; José M. Franco-Zorrilla; David Twell; Frédéric Berger; Takashi Araki, Nat. Commun., 9, 5283, 2018
DOI: 10.1038/s41467-018-07728-3.
[30] An evolutionary conserved abscisic acid signaling pathway regulates dormancy in the liverwort Marchantia polymorpha,
D. Magnus Eklund; Masakazu Kanei; Eduardo Flores-Sandova; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi; Ulf Lagercrantz; Rishikesh P. Bhalerao; Yoichi Sakata; John L. Bowman, Curr. Biol., 28, 22, 3691 - 3699, 2018
DOI: 10.1016/j.cub.2018.10.018.
[29] Efficient CRISPR/Cas9-based genome editing and its application to conditional genetic analysis in Marchantia polymorpha,
Shigeo S. Sugano; Ryuichi Nishihama; Makoto Shirakawa; Junpei Takagi; Yoriko Matsuda; Sakiko Ishida; Tomoo Shimada; Ikuko Hara-Nishimura; Keishi Osakabe; Takayuki Kohchi, PLOS ONE, 13, 10, e0205117, 2018
DOI: 10.1371/journal.pone.0205117.
[28] Novel gateway binary vectors for rapid tripartite DNA assembly and promoter analysis with various reporters and tags in the liverwort Marchantia polymorpha,
Shoji Mano; Ryuichi Nishihama; Sakiko Ishida; Kazumi Hikino; Maki Kondo; Mikio Nishimura; Katsuyuki T. Yamato; Takayuki Kohchi; Tsuyoshi Nakagawa, PLOS ONE, 13, 10, e0204964, 2018
DOI: 10.1371/journal.pone.0204964.
[27] ANGUSTIFOLIA contributes to the regulation of three-dimensional morphogenesis in the liverwort Marchantia polymorpha,
Tomoyuki Furuya; Koro Hattori; Yoshitaka Kimori; Sakiko Ishida; Ryuichi Nishihama; Takayuki Kohchi; Hirokazu Tsukaya, Development, 145, dev161398, 2018
DOI: 10.1242/dev.161398.
[26] Synaptotagmin-Associated Endoplasmic Reticulum-Plasma Membrane Contact Sites Are Localized to Immobile ER Tubules,
Kazuya Ishikawa; Kentaro Tamura; Haruko Ueda; Yoko Ito; Akihiko Nakano; Ikuko Hara-Nishimura; Tomoo Shimada, Plant Physiol., 178, 641 - 653, 2018
DOI: 10.1104/pp.18.00498.
[25] Loss of CG methylation in Marchantia polymorpha causes disorganization of cell division and reveals unique DNA methylation regulatory mechanisms of non-CG methylation,
Yoko Ikeda; Ryuichi Nishihama; Shohei Yamaoka; Mario A Arteaga-Vazquez; Adolfo Aguilar-Cruz; Daniel Grimanelli; Romain Pogorelcnik; Robert A Martienssen; Katsuyuki T Yamato; Takayuki Kohchi; Takashi Hirayama; Olivier Mathieu, Plant Cell Physiol., 59, 12, 2421 - 2431, 2018
DOI: 10.1093/pcp/pcy161.
[24] The AP-1 Complex is Required for Proper Mucilage Formation in Arabidopsis Seeds,
Tomoo Shimada; Tadashi Kunieda; Sakura Sumi; Yasuko Koumoto; Kentaro Tamura; Kyoko Hatano; Haruko Ueda; Ikuko Hara-Nishimura, Plant Cell Physiol., , 2018
DOI: 10.1093/pcp/pcy158.
[23] Cryopreservation of Marchantia polymorpha spermatozoa,
Taisuke Togawa; Tohru Adachi; Daijiro Harada; Tasuku Mitani; Daisuke Tanaka; Kimitsune Ishizaki; Takayuki Kohchi; Katsuyuki T. Yamato, J. Plant Res., 131, 6, 1047 - 1054, 2018
DOI: 10.1007/s10265-018-1059-0.
[22] WIND1 induces dynamic metabolomic reprogramming during regeneration in Brassica napus,
Akira Iwase; Kento Mita; David S.Favero; Nobutaka Mitsuda; Ryosuke Sasaki; Makoto Kobayshi; Yumiko Takebayashi; Mikiko Kojima; Miyako Kusano; Akira Oikawa; Hitoshi Sakakibara; Kazuki Saito; Jun Imamura; Keiko Sugimoto, Dev. Biol., 442, 1, 40 - 52, 2018
DOI: 10.1016/j.ydbio.2018.07.006.
[21] Endoplasmic Reticulum (ER) Membrane Proteins (LUNAPARKs) are Required for Proper Configuration of the Cortical ER Network in Plant Cells,
Haruko Ueda; Natsumi Ohta; Yoshitaka Kimori; Teruka Uchida; Tomoo Shimada; Kentaro Tamura; Ikuko Hara-Nishimura, Plant Cell Physiol., 59, 10, 1931 - 1941, 2018
DOI: 10.1093/pcp/pcy137.
[20] An allelic series at the KARRIKIN INSENSITIVE2 locus of Arabidopsis thaliana decouples ligand hydrolysis and receptor degradation from downstream signalling,
Jiaren Yao; Kiyoshi Mashiguchi; Adrian Scaffidi; Tomoki Akatsu; Kim T. Melville; Ryo Morita; Yu Morimoto; Steven M. Smith; Yoshiya Seto; Gavin R. Flematti; Shinjiro Yamaguchi; Mark T. Waters, PLANT J., , 2018
DOI: 10.1111/tpj.14017.
[19] Growth‐ and stress‐related defects associated with wall hypoacetylation are strigolactone‐dependent,
Vicente Ramírez; Guangyan Xiong; Kiyoshi Mashiguchi; Shinjiro Yamaguchi; Markus Pauly, Plant Direct, 2, 6, e00062, 2018
DOI: 10.1002/pld3.62.
[18] Upregulation of DWARF27 is associated with increased strigolactone levels under sulfur deficiency in rice,
Masato Shindo; Koichiro Shimomura; Shinjiro Yamaguchi; Mikihisa Umehara, Plant Direct, 2, 4, e00050, 2018
DOI: 10.1002/pld3.50.
[17] Ligand-receptor co-evolution shaped the jasmonate pathway in land plants.,
Isabel Monte; Sakiko Ishida; Angel M. Zamarreño; Mats Hamberg; José M. Franco-Zorrilla; Gloria García-Casado; Caroline Gouhier-Darimont; Philippe Reymond; Kosaku Takahashi; José M. García-Mina; Ryuichi Nishihama; Takayuki Kohchi; Roberto Solano, Nat. Chem. Biol., 14, 5, 480 - 488, 2018
DOI: 10.1038/s41589-018-0033-4.
[16] SPIRAL2 Stabilises Endoplasmic Microtubule Minus Ends in the Moss Physcomitrella patens.,
Shu Yao Leong; Moé Yamada; Naoki Yanagisawa; Gohta Goshima, Cell Struct Funct., 43, 1, 53 - 60, 2018
DOI: 10.1247/csf.18001.
[15] Generative Cell Specification Requires Transcription Factors Evolutionarily Conserved in Land Plants,
Shohei Yamaoka; Ryuichi Nishihama; Yoshihiro Yoshitake; Sakiko Ishida; Keisuke Inoue; Misaki Saito; Keitaro Okahashi; Haonan Bao; Hiroyuki Nishida; Katsushi Yamaguchi; Shuji Shigenobu; Kimitsune Ishizaki; Katsuyuki T. Yamato; Takayuki Kohchi, Curr. Biol., 28, 479 - 486, 2018
DOI: 10.1016/j.cub.2017.12.053.

2017

[14] Insights into land plant evolution gernered from the Marchantia polymorpha genome.,
John L. Bowman; Takayuki Kohchi; Katsuyuki T. Yamato; Jerry Jenkins; Shengqiang Shu; Kimitsune Ishizaki; Shohei Yamaoka; Ryuichi Nishihama; Yasukazu Nakamura; Frédéric Berger; Catherine Adam; Shiori Sugamata Aki; Felix Althoff; Takashi Araki; Mario A. Arteaga-Vazquez; Sureshkumar Balasubrmanian; Kerrie Barry; et al., Cell, 171, 2, 287 - 304, 2017
DOI: 10.1016/j.cell.2017.09.030.
[13] The role of the sole activator-type Auxin Response Factor in pattern formation of Marchantia polymorpha,
Hirotaka Kato; Masaru Kouno; Mayuko Takeda; Hidemasa Suzuki; Kimitsune Ishizaki; Ryuichi Nishihama; Takayuki Kohchi, Plant Cell Physiol., 58, 10, 1642 - 1651, 2017
DOI: 10.1093/pcp/pcx095.
[12] Cytoplasmic MTOCs control spindle orientation for asymmetric cell division in plants,
Ken Kosetsu; Takashi Murata; Moé Yamada; Momoko Nishina; Joanna Boruc; Mitsuyasu Hasebe; Daniël Van Damme; Gohta Goshima, Proc. Natl. Acad. Sci. USA, 114, 42, E8847 - E8854, 2017
DOI: 10.1073/pnas.1713925114.
[11] Human microcephaly ASPM protein is a spindle pole-focusing factor that functions redundantly with CDK5RAP2,
Elsa A. Tungadi; Ami Ito; Tomomi Kiyomitsu; Gohta Goshima, J. Cell Sci., 130, 21, 3676 - 3684, 2017
DOI: 10.1242/jcs.203703.
[10] Inositol hexakis phosphate is the seasonal phosphorus reservoir in the deciduous woody plant Populus alba L.,
Yuko Kurita; Kei'ichi Baba; Miwa Ohnishi; Ryosuke Matsubara; Keiko Kosuge; Aya Anegawa; Chizuko Shichijo; Kimitsune Ishizaki; Yasuko Kaneko; Masahiro Hayashi; Toshinobu Suzaki; Hidehiro Fukaki; Tetsuro Mimura, Plant Cell Physiol., 58, 9, 1477 - 1485, 2017
DOI: 10.1093/pcp/pcx106.
[9] 14-3-3 regulation of Ncd reveals a new mechanism for targeting proteins to the spindle in oocytes,
Robin Beaven; Ricardo Nunes Bastos; Christos Spanos; Pierre Romé; C. Fiona Cullen; Juri Rappsilber; Régis Giet; Gohta Goshima; Hiroyuki Ohkura, J. Cell Biol., 216, 10, 3029 - 3039, 2017
DOI: 10.1083/jcb.201704120.
[8] Systemic transport of trans-zeatin and its precursor have differing roles in shoots of Arabidopsis,
Asami Osugi; Mikiko Kojima; Yumiko Takebayashi; Nanae Ueda; Takatoshi Kiba; Hitoshi Sakakibara, Nat. Plants, 3, 17112, 2017
DOI: 10.1038/nplants.2017.112.
[7] Land plants drive photorespiration as higher electron-sink: comparative study of post-illumination transient O2-uptake rates from liverworts to angiosperms through ferns and gymnosperms.,
Hitomi Hanawa; Kimitsune Ishizaki; Kana Nohira; Daisuke Takagi; Ginga Shimakawa; Takehiro Sejima; Keiichiro Shaku; Amane Makino; Chikahiro Miyake, Physiol. Plant., 161, 1, 138 - 149, 2017
DOI: 10.1111/ppl.12580.
[6] Diversity of strategies for escaping reactive oxygen species production within photosystem I among land plants: P700 oxidation system is prerequisite for alleviating photoinhibition in photosystem I.,
Daisuke Takagi; Kimitsune Ishizaki; Hitomi Hanawa; Tomohito Mabuchi; Ginga Shimakawa; Hiroshi Yamamoto; Chikahiro Miyake, Physiol. Plant., 161, 1, 56 - 74, 2017
DOI: 10.1111/ppl.12562.
[5] Dynamic reorganization of the endomembrane system during spermatogenesis in Marchantia polymorpha,
Naoki Minamino; Takehiro Kanazawa; Ryuichi Nishihama; Katsuyuki T. Yamato; Kimitsune Ishizaki; Takayuki Kohchi; Akihiko Nakano; Takashi Ueda, J. Plant Res., 130, 3, 433 - 441, 2017
DOI: 10.1007/s10265-017-0909-5.
[4] Multiple kinesin-14 family members drive microtubule minus end–directed transport in plant cells,
Moé Yamada; Yohko Tanaka-Takiguchi; Masahito Hayashi; Momoko Nishina; Gohta Goshima, J. Cell Biol., 216, 6, 1705 - 1714, 2017
DOI: 10.1083/jcb.201610065.
[3] Regulation of Strigolactone Biosynthesis by Gibberellin Signaling,
Shinsaku Ito; Daichi Yamagami; Mikihisa Umehara; Atsushi Hanada; Satoko Yoshida; Yasuyuki Sasaki; Shunsuke Yajima; Junko Kyozuka; Miyako Ueguchi-Tanaka; Makoto Matsuoka; Ken Shirasu; Shinjiro Yamaguchi; Tadao Asami, Plant Physiol., 174, 2, 1250 - 1259, 2017
DOI: 10.1104/pp.17.00301.
[2] Chloroplastic ATP synthase builds up proton motive force for preventing reactive oxygen species production in photosystem I,
Daisuke Takagi; Katsumi Amako; Masaki Hashiguchi; Hidehiro Fukaki; Tatsuaki Goh; Yoichiro Fukao; Ryosuke Sano; Tetsuya Kurata; Taku Demura; Shinichiro Sawa; Chikahiro Miyake, PLANT J., 91, 2, 306 - 324, 2017
DOI: 10.1111/tpj.13566.
[1] Occurrence of brassinosteroids in non-flowering land plants, liverwort, moss, lycophyte and fern,
Takao Yokota; Toshiyuki Ohnishi; Kyomi Shibata; Masashi Asahina; Takahito Nomura; Tomomichi Fujita; Kimitsune Ishizaki; Takayuki Kohchi, Phytochemistry, 136, 46 - 55, 2017
DOI: 10.1016/j.phytochem.2016.12.020.